Detailed information NTG0701077

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: NF673_RS19240
• Genome accession: NZ_CP099609
• Coordinates: 4362982..4365216 (-)
• Length: 744 a.a.
• NCBI ID: WP_252880633.1
• Uniprot ID: -
• Organism: Pseudomonas moraviensis strain OTU5MASSA1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4357982..4370216

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NF673_RS19205 (NF673_19205)	murB	4358359..4359378 (-)	1020	WP_227972839.1	UDP-N-acetylmuramate dehydrogenase	-
NF673_RS19210 (NF673_19210)	-	4359375..4359839 (-)	465	WP_064361450.1	low molecular weight protein-tyrosine-phosphatase	-
NF673_RS19215 (NF673_19215)	kdsB	4359839..4360603 (-)	765	WP_123418958.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
NF673_RS19220 (NF673_19220)	-	4360600..4360785 (-)	186	WP_003179363.1	Trm112 family protein	-
NF673_RS19225 (NF673_19225)	lpxK	4360810..4361820 (-)	1011	WP_252880632.1	tetraacyldisaccharide 4'-kinase	-
NF673_RS19230 (NF673_19230)	-	4361820..4362248 (-)	429	WP_042610688.1	biopolymer transporter ExbD	-
NF673_RS19235 (NF673_19235)	exbB	4362245..4362880 (-)	636	WP_007908216.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
NF673_RS19240 (NF673_19240)	comA	4362982..4365216 (-)	2235	WP_252880633.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NF673_RS19245 (NF673_19245)	-	4365353..4365871 (+)	519	WP_042610686.1	DUF2062 domain-containing protein	-
NF673_RS19250 (NF673_19250)	-	4366015..4366794 (-)	780	WP_039760202.1	ABC transporter permease	-
NF673_RS19255 (NF673_19255)	-	4366791..4367723 (-)	933	WP_042610685.1	ABC transporter ATP-binding protein	-
NF673_RS19260 (NF673_19260)	-	4367857..4368480 (-)	624	WP_042610684.1	glutathione S-transferase	-
NF673_RS19265 (NF673_19265)	-	4368524..4369183 (-)	660	WP_064361446.1	transglutaminase family protein	-

Sequence

Protein

• Length: 744 a.a.
• Molecular weight: 81841.06 Da
• Isoelectric Point: 9.6398

>NTDB_id=701077 NF673_RS19240 WP_252880633.1 4362982..4365216(-) (comA) [Pseudomonas moraviensis strain OTU5MASSA1]
MRTGMMALAVGLLAPVFLPALPPVGWWVVLPVVALMVLPFRSYPLAFLLFGFTWACVGAQMALNDRLPPPLDGETRWLEG
RVVGLPQHGDGVVRFELADARSRHEKLPSLMRLAWYAGPPVNSGERWRLAVKLKRPGGLLNPNAFDYEAWLLAQRIGAIG
TIKDGQRLAEARYAWRDSVRQRLLAVDAQGREGALAALVLGDGSGLSREDWQVLQDTGTVHLLVISGQHIGLLAAVMYLL
VAGLARYGLWPLRWPWLPWACGLAFAAALGYGLLAGFDVPVQRACVMVALVLLWRLRFRHLGAWRPLLLAFNGVLLFDPL
ASLRPGFWLSFAAVAVLIFTFGGRLGAWRWWQTWTRAQWLIAIGLCPVLLALSLPISVSGPVANLLAVPWVSLVVLPPAL
LGTLLLPVPYVGEGLLWLAGGLIDWLFIGLALIAGQWPAWIPAAIPLWALVLGSLGALLLLLPRGVPLRPLGWPLMLLLI
LPPRERIEEGRADVWQLDVGQGLAILVRTRHHALLYDAGPRFGEFDLGERVVLPALRKLNVQTLDLMLLSHADADHAGGA
GAVMRGLDVHRIVSGDPPNLPPELSAEACASGEQWQWDGVQFQLWQWSAADDSNQRSCVLQIEANGERLLLTGDIDIHAE
RVLLDSPLAVPTQWLQSPHHGSRSSSSMALLKALQPESVLISRGHGNSFGHPHPTVLARYRKQGLRIYDSAEQGAIHLQL
GSFKPPWTMRHQRRFWREPPALGR

Nucleotide

• Length: 2235 bp

>NTDB_id=701077 NF673_RS19240 WP_252880633.1 4362982..4365216(-) (comA) [Pseudomonas moraviensis strain OTU5MASSA1]
ATGCGCACAGGGATGATGGCGCTGGCAGTCGGTCTGCTGGCCCCGGTTTTTTTGCCGGCCTTGCCGCCGGTCGGTTGGTG
GGTGGTACTGCCGGTGGTGGCGCTGATGGTCCTACCGTTTCGCAGCTATCCACTGGCATTTTTGTTGTTTGGCTTCACAT
GGGCCTGCGTCGGCGCGCAGATGGCTCTGAATGACCGCTTGCCGCCGCCACTGGACGGCGAAACCCGTTGGCTCGAGGGG
CGTGTGGTCGGCTTGCCGCAGCACGGCGACGGTGTGGTGCGTTTCGAACTGGCTGACGCCCGCTCGCGCCACGAAAAGCT
GCCATCGCTGATGCGCCTGGCCTGGTACGCCGGGCCGCCGGTCAACAGCGGCGAACGCTGGCGTCTGGCGGTGAAGTTGA
AGCGCCCGGGTGGCTTGCTCAACCCGAACGCCTTCGATTACGAGGCCTGGCTGCTCGCCCAGCGCATCGGTGCGATCGGT
ACGATCAAGGATGGCCAGCGTCTGGCTGAGGCCCGGTACGCCTGGCGCGACAGCGTTCGTCAGCGCCTGCTGGCGGTCGA
TGCGCAGGGGCGAGAGGGCGCGTTGGCGGCGCTGGTGCTCGGCGACGGTTCGGGTCTGAGTCGCGAGGACTGGCAGGTAC
TGCAAGACACCGGCACCGTGCATTTGCTGGTGATTTCCGGCCAGCACATCGGCTTGCTCGCCGCGGTGATGTATCTGCTG
GTCGCGGGGCTTGCGCGATACGGTTTGTGGCCGTTGCGCTGGCCATGGCTGCCCTGGGCATGCGGCCTGGCCTTCGCGGC
GGCGCTGGGTTATGGCTTGCTCGCCGGTTTCGATGTGCCGGTGCAGCGCGCCTGCGTGATGGTGGCGCTGGTGCTGTTGT
GGCGCCTGCGTTTTCGCCATCTCGGTGCGTGGAGGCCGTTGTTGCTGGCGTTCAACGGCGTGCTGCTGTTTGATCCGTTG
GCCAGTTTGCGTCCCGGTTTCTGGCTGTCTTTCGCCGCGGTGGCCGTACTGATTTTCACCTTCGGCGGGCGGCTGGGCGC
TTGGCGCTGGTGGCAGACCTGGACCCGCGCGCAGTGGCTGATCGCGATTGGCTTGTGTCCGGTGTTGCTGGCGCTCAGCC
TGCCGATCAGCGTCAGTGGCCCTGTGGCGAATCTGTTGGCGGTGCCGTGGGTCAGTCTTGTGGTATTGCCGCCGGCGTTG
CTCGGCACGCTATTGCTGCCCGTGCCTTATGTTGGCGAAGGGTTGTTGTGGCTGGCCGGTGGTTTGATCGACTGGCTGTT
TATCGGACTGGCGCTGATTGCCGGGCAATGGCCGGCGTGGATACCTGCCGCTATTCCATTGTGGGCGCTGGTCTTGGGCA
GCCTCGGCGCCTTGTTATTGCTGTTGCCCCGTGGTGTGCCGCTGCGTCCATTGGGCTGGCCGTTGATGTTGCTGCTGATA
TTGCCGCCGCGAGAGCGAATAGAAGAGGGGCGGGCCGATGTCTGGCAACTCGACGTCGGCCAAGGCCTGGCCATCCTCGT
GCGCACCCGCCATCACGCGTTGCTCTATGACGCCGGGCCGCGTTTTGGCGAGTTCGATCTCGGCGAGCGGGTGGTGCTGC
CAGCGCTGCGCAAACTCAATGTGCAAACGCTCGACCTGATGCTGCTCAGCCATGCCGACGCCGATCACGCTGGCGGCGCC
GGGGCAGTGATGCGTGGATTGGACGTGCACCGCATCGTCAGTGGCGACCCGCCAAACCTGCCGCCGGAGTTGAGCGCCGA
AGCCTGCGCAAGTGGCGAACAGTGGCAGTGGGATGGCGTGCAGTTCCAGCTCTGGCAATGGTCGGCGGCCGATGACAGCA
ACCAGCGCTCCTGTGTCTTGCAGATCGAAGCCAACGGCGAGCGCCTGCTGCTCACCGGCGACATCGACATTCACGCCGAG
CGCGTTCTGCTCGACAGTCCACTGGCGGTGCCGACGCAGTGGCTGCAATCGCCGCATCACGGCAGTCGCAGCTCATCGTC
GATGGCCCTGCTCAAAGCCTTGCAGCCGGAATCAGTGCTGATCTCCCGCGGCCACGGCAACTCCTTCGGTCACCCGCATC
CGACCGTACTTGCGCGCTACCGCAAGCAAGGCCTGCGCATCTATGACAGCGCCGAACAGGGCGCCATCCATCTGCAACTG
GGCAGCTTCAAACCGCCGTGGACGATGCGTCACCAGCGGCGTTTCTGGCGCGAGCCGCCGGCGCTTGGCCGTTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (198-464)

• Domain of unknown function (DUF4131) (DUF4131) (24-167)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-685)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	62.726	96.64	0.606
comA	Ralstonia pseudosolanacearum GMI1000	35.347	100	0.37