Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EL240_RS00040 | Genome accession | NZ_AP018538 |
| Coordinates | 9697..10263 (+) | Length | 188 a.a. |
| NCBI ID | WP_002364599.1 | Uniprot ID | A0A1B4XKB5 |
| Organism | Enterococcus faecalis strain KUB3006 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4697..15263
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL240_RS00030 (KUB3006_C00060) | gyrA | 6674..9175 (+) | 2502 | WP_089201965.1 | DNA gyrase subunit A | - |
| EL240_RS00035 (KUB3006_C00070) | rpsF | 9350..9652 (+) | 303 | WP_002356019.1 | 30S ribosomal protein S6 | - |
| EL240_RS00040 (KUB3006_C00080) | ssb | 9697..10263 (+) | 567 | WP_002364599.1 | single-stranded DNA-binding protein | Machinery gene |
| EL240_RS00045 (KUB3006_C00090) | rpsR | 10289..10528 (+) | 240 | WP_002356021.1 | 30S ribosomal protein S18 | - |
| EL240_RS00050 (KUB3006_C00100) | - | 10685..12709 (+) | 2025 | WP_002363542.1 | DHH family phosphoesterase | - |
| EL240_RS00055 (KUB3006_C00110) | rplI | 12715..13167 (+) | 453 | WP_002356023.1 | 50S ribosomal protein L9 | - |
| EL240_RS00060 (KUB3006_C00120) | dnaB | 13441..14808 (+) | 1368 | WP_002381331.1 | replicative DNA helicase | - |
Sequence
Protein
Download Length: 188 a.a. Molecular weight: 20574.18 Da Isoelectric Point: 4.6010
>NTDB_id=69876 EL240_RS00040 WP_002364599.1 9697..10263(+) (ssb) [Enterococcus faecalis strain KUB3006]
MINNVVLVGRLTKDPDLRYTASGSAVATFTLAVNRNFTNQNGDREADFINCVIWRKPAETMANYARKGTLLGVVGRIQTR
NYENQQGQRVYVTEVVCENFQLLESRSASEQRGTGGGSFNNNENGYQSQNRSFGNNNAGSGFNNNNNSFNPSSSQSQNNN
GMPDFDKDSDPFGGSGSSIDISDDDLPF
MINNVVLVGRLTKDPDLRYTASGSAVATFTLAVNRNFTNQNGDREADFINCVIWRKPAETMANYARKGTLLGVVGRIQTR
NYENQQGQRVYVTEVVCENFQLLESRSASEQRGTGGGSFNNNENGYQSQNRSFGNNNAGSGFNNNNNSFNPSSSQSQNNN
GMPDFDKDSDPFGGSGSSIDISDDDLPF
Nucleotide
Download Length: 567 bp
>NTDB_id=69876 EL240_RS00040 WP_002364599.1 9697..10263(+) (ssb) [Enterococcus faecalis strain KUB3006]
ATGATTAATAACGTTGTATTAGTCGGAAGATTGACAAAAGATCCTGACTTACGTTACACCGCTAGTGGTTCAGCTGTTGC
GACCTTTACACTTGCTGTAAACCGTAACTTTACGAATCAAAATGGTGACCGTGAAGCAGACTTTATCAACTGTGTGATTT
GGCGTAAACCCGCAGAAACAATGGCTAATTATGCCCGTAAAGGTACATTATTAGGTGTTGTCGGAAGAATTCAAACTCGT
AACTACGAGAACCAACAAGGTCAACGTGTCTACGTAACTGAAGTGGTTTGTGAAAACTTCCAATTGTTAGAATCTCGTTC
TGCTTCAGAACAAAGAGGAACTGGCGGCGGTAGCTTTAATAACAACGAAAATGGTTATCAATCACAAAATCGTAGCTTTG
GTAATAACAATGCCGGTTCTGGATTTAATAACAACAACAATAGTTTCAATCCATCATCTTCTCAGTCGCAAAACAATAAC
GGTATGCCTGATTTCGATAAAGATTCTGATCCATTTGGTGGCTCAGGTTCATCTATCGACATTTCAGATGATGATTTACC
ATTCTAA
ATGATTAATAACGTTGTATTAGTCGGAAGATTGACAAAAGATCCTGACTTACGTTACACCGCTAGTGGTTCAGCTGTTGC
GACCTTTACACTTGCTGTAAACCGTAACTTTACGAATCAAAATGGTGACCGTGAAGCAGACTTTATCAACTGTGTGATTT
GGCGTAAACCCGCAGAAACAATGGCTAATTATGCCCGTAAAGGTACATTATTAGGTGTTGTCGGAAGAATTCAAACTCGT
AACTACGAGAACCAACAAGGTCAACGTGTCTACGTAACTGAAGTGGTTTGTGAAAACTTCCAATTGTTAGAATCTCGTTC
TGCTTCAGAACAAAGAGGAACTGGCGGCGGTAGCTTTAATAACAACGAAAATGGTTATCAATCACAAAATCGTAGCTTTG
GTAATAACAATGCCGGTTCTGGATTTAATAACAACAACAATAGTTTCAATCCATCATCTTCTCAGTCGCAAAACAATAAC
GGTATGCCTGATTTCGATAAAGATTCTGATCCATTTGGTGGCTCAGGTTCATCTATCGACATTTCAGATGATGATTTACC
ATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
60.638 |
100 |
0.606 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
52.85 |
100 |
0.543 |