Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   NE421_RS03285 Genome accession   NZ_CP098791
Coordinates   697906..698316 (+) Length   136 a.a.
NCBI ID   WP_002067305.1    Uniprot ID   A0A333UQE7
Organism   Acinetobacter baumannii strain 280820     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 692906..703316
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NE421_RS03270 (NE421_03270) - 693895..696201 (+) 2307 WP_000259109.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  NE421_RS03275 (NE421_03275) - 696246..697019 (-) 774 WP_031966642.1 SDR family oxidoreductase -
  NE421_RS03280 (NE421_03280) mazG 697131..697937 (+) 807 WP_000359485.1 nucleoside triphosphate pyrophosphohydrolase -
  NE421_RS03285 (NE421_03285) comEA 697906..698316 (+) 411 WP_002067305.1 ComEA family DNA-binding protein Machinery gene
  NE421_RS03290 (NE421_03290) pcnB 698441..699904 (+) 1464 WP_001194201.1 polynucleotide adenylyltransferase PcnB -
  NE421_RS03295 (NE421_03295) folK 699901..700383 (+) 483 WP_000219221.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  NE421_RS03300 (NE421_03300) panB 700429..701238 (+) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  NE421_RS03305 (NE421_03305) panC 701242..702090 (+) 849 WP_000846362.1 pantoate--beta-alanine ligase -
  NE421_RS03310 (NE421_03310) rapZ 702113..702964 (+) 852 WP_000821671.1 RNase adapter RapZ -
  NE421_RS03315 (NE421_03315) - 702961..703230 (+) 270 WP_000567533.1 HPr family phosphocarrier protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15668.96 Da        Isoelectric Point: 10.4475

>NTDB_id=698019 NE421_RS03285 WP_002067305.1 697906..698316(+) (comEA) [Acinetobacter baumannii strain 280820]
MQYSMRFWKNKYFLLIILCLGVISPSVYAQSFDKNFQEWKAKQQMYDQKLNISKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGIGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=698019 NE421_RS03285 WP_002067305.1 697906..698316(+) (comEA) [Acinetobacter baumannii strain 280820]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTCTTTTAATAATTTTGTGCTTGGGAGTAATTTCACCTTCGGT
TTACGCTCAATCTTTTGACAAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCTCTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(74-134)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A333UQE7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

96.324

100

0.963
  comEA Acinetobacter baumannii D1279779

95.588

100

0.956
  comEA Acinetobacter baylyi ADP1

42.748

96.324

0.412