Detailed information NTG0697520

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: NDR85_RS02175
• Genome accession: NZ_CP098738
• Coordinates: 430417..431565 (+)
• Length: 382 a.a.
• NCBI ID: WP_024120212.1
• Uniprot ID: A0A7G7UCE4
• Organism: Bacillus halotolerans strain XE48
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 425417..436565

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDR85_RS02155 (NDR85_02155)	-	425788..426468 (-)	681	WP_044161887.1	ABC transporter ATP-binding protein	-
NDR85_RS02160 (NDR85_02160)	-	426484..427938 (-)	1455	WP_217828137.1	ABC transporter permease	-
NDR85_RS02165 (NDR85_02165)	yclJ	428151..428834 (+)	684	WP_024120210.1	two-component system response regulator YclJ	-
NDR85_RS02170 (NDR85_02170)	-	428821..430230 (+)	1410	WP_082687805.1	HAMP domain-containing sensor histidine kinase	-
NDR85_RS02175 (NDR85_02175)	rapC	430417..431565 (+)	1149	WP_024120212.1	response regulator aspartate phosphatase RapC	Regulator
NDR85_RS02180 (NDR85_02180)	phrC	431549..431671 (+)	123	WP_010333023.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
NDR85_RS02185 (NDR85_02185)	-	431776..431868 (-)	93	WP_024120214.1	YjcZ family sporulation protein	-
NDR85_RS02190 (NDR85_02190)	-	432015..432125 (-)	111	WP_024120215.1	YjcZ family sporulation protein	-
NDR85_RS02195 (NDR85_02195)	-	432278..433642 (-)	1365	WP_069487496.1	aspartate kinase	-
NDR85_RS02200 (NDR85_02200)	ceuB	434028..434978 (+)	951	WP_263870872.1	petrobactin ABC transporter permease YclN	Machinery gene
NDR85_RS02205 (NDR85_02205)	yclO	434971..435918 (+)	948	WP_263870873.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45690.75 Da
• Isoelectric Point: 5.2483

>NTDB_id=697520 NDR85_RS02175 WP_024120212.1 430417..431565(+) (rapC) [Bacillus halotolerans strain XE48]
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVSDHIERAEFYFKIAEAYYYMKQTYF
SLIHIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALEMAEAEQKAQLVGRAFYNLGLCYYNQDLLD
PAIEHFEKAVSTFENSRITNSLPQAYFLITLIYYKRGKHEKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQAQPNTEG
IERCFRYLKNKNMYADIEDLGLEVAKYYYEQKWFELSASYFLRVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=697520 NDR85_RS02175 WP_024120212.1 430417..431565(+) (rapC) [Bacillus halotolerans strain XE48]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGGACCTTCAGCGT
GCCGGATGCCGAGGTGCTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGTTATATT
ACTCACTAATGGAATTTCGCCACCAGCTTATGCTTGATTATCTCGAGCCGCTGGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCAGAATTATCACGAAATATAGACAGCAACCAAGCTGATCTGAAAGGGCTTCTCGATTATTATGTGAATTTTTT
CCGCGGAATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATATTATAAACAGGCGGAGAAAAAACTTTCTT
TTGTTTCCGATCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTACTTT
TCATTGATTCATATCAAAAATGCATATGAAATTTATGTAGAGCAGGAAACCTATAATGTTCGGATTATCCAATGCCATTT
TGTGTTCGGGGTTAACCTCATGGATGAGAGAAATTTTGAACAAGCCGCACGGCATTTCAAATTGGCGCTGGAGATGGCGG
AAGCGGAACAAAAAGCCCAATTGGTTGGAAGAGCATTTTATAATTTAGGGCTGTGTTATTACAATCAAGACCTCCTCGAC
CCTGCCATTGAACATTTTGAGAAAGCGGTTTCCACTTTTGAAAACAGCAGAATCACCAATTCTCTGCCTCAAGCATATTT
TTTAATAACACTTATTTATTATAAACGCGGAAAACATGAGAAGGCCTCGGAATATCACAAGAGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGATTACGCGGTAAAATTTGAGTTTTTACAATCCCTATATCAGGCACAGCCCAATACAGAAGGA
ATCGAACGATGTTTCCGATATTTAAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGGCCTAGAAGTAGCAAAATA
TTACTATGAACAAAAATGGTTTGAACTGTCTGCTTCCTACTTTCTTAGAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

• Tetratricopeptide repeat (TPR_12) (224-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	95.026	100	0.95
rapF	Bacillus subtilis subsp. subtilis str. 168	56.316	99.476	0.56