Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   M5E07_RS03910 Genome accession   NZ_CP098732
Coordinates   826395..826778 (+) Length   127 a.a.
NCBI ID   WP_116760298.1    Uniprot ID   -
Organism   Acinetobacter tibetensis strain Y-23     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 821395..831778
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5E07_RS03900 (M5E07_03900) - 824345..825442 (-) 1098 WP_252222168.1 efflux RND transporter periplasmic adaptor subunit -
  M5E07_RS03905 (M5E07_03905) - 825470..826111 (-) 642 WP_252222170.1 hypothetical protein -
  M5E07_RS03910 (M5E07_03910) pilG 826395..826778 (+) 384 WP_116760298.1 twitching motility response regulator PilG Regulator
  M5E07_RS03915 (M5E07_03915) - 826799..827167 (+) 369 WP_116760300.1 response regulator -
  M5E07_RS03920 (M5E07_03920) - 827171..827707 (+) 537 WP_116760302.1 chemotaxis protein CheW -
  M5E07_RS03925 (M5E07_03925) - 827756..829828 (+) 2073 WP_252222172.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14213.27 Da        Isoelectric Point: 4.7065

>NTDB_id=697468 M5E07_RS03910 WP_116760298.1 826395..826778(+) (pilG) [Acinetobacter tibetensis strain Y-23]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCDVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVTA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=697468 M5E07_RS03910 WP_116760298.1 826395..826778(+) (pilG) [Acinetobacter tibetensis strain Y-23]
ATGGACGATAAATTTCAAAATCTAAAAGTCATGGTAATTGATGATTCAAAAACCATTCGTCGTACAGCCGAAACATTATT
ACAACGTGAAGGTTGTGATGTGGTCACCGCAGTAGATGGCTTTGAAGCTTTATCAAAAATTGCTGAAGCAAATCCAGATA
TTGTTTTTGTCGATATCATGATGCCGCGTCTAGATGGCTATCAAACTTGTGCACTGATTAAAAACTCACAAAATTATCAA
AATATTCCTGTCATTATGTTATCGAGTAAAGATGGCTTATTTGATCAGGCTAAAGGACGTGTTGTCGGTTCTGATGAATA
TTTAACAAAACCATTCAGTAAAGATGAACTTTTAAACGCAATTCGTAATCACGTAACAGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37