Detailed information NTG0696403

Bioinformatically predicted

Overview

• Name: pilL
• Type: Machinery gene
• Locus tag: NDL73_RS11590
• Genome accession: NZ_CP098503
• Coordinates: 2202660..2203133 (+)
• Length: 157 a.a.
• NCBI ID: WP_172760650.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 10268
• Function: type IV pilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	2196767..2210260	2202660..2203133	within	0

Gene organization within MGE regions

Location: 2196767..2210260

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDL73_RS11555 (NDL73_02305)	-	2196767..2197276 (+)	510	WP_003687909.1	isoprenylcysteine carboxyl methyltransferase family protein	-
NDL73_RS11560 (NDL73_02310)	-	2197508..2198089 (-)	582	WP_003690895.1	superoxide dismutase	-
NDL73_RS11565 (NDL73_02315)	dnaB	2198253..2199659 (+)	1407	WP_003699622.1	replicative DNA helicase	-
NDL73_RS11570 (NDL73_02320)	pilH	2199813..2200478 (+)	666	WP_229931479.1	Tfp pilus assembly protein FimT/FimU	Machinery gene
NDL73_RS11575 (NDL73_02325)	pilV	2200510..2201121 (+)	612	WP_003699626.1	type IV pilus modification protein PilV	Machinery gene
NDL73_RS11580 (NDL73_02330)	pilJ	2201118..2202068 (+)	951	WP_003699627.1	PilW family protein	Machinery gene
NDL73_RS11585 (NDL73_02335)	pilK	2202047..2202658 (+)	612	WP_033911077.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
NDL73_RS11590 (NDL73_02340)	pilL	2202660..2203133 (+)	474	WP_172760650.1	PilX family type IV pilin	Machinery gene
NDL73_RS11595 (NDL73_02345)	-	2203203..2203511 (-)	309	WP_025456177.1	AzlD family protein	-
NDL73_RS11600 (NDL73_02350)	-	2203508..2204218 (-)	711	Protein_2243	AzlC family ABC transporter permease	-
NDL73_RS11605 (NDL73_02355)	dut	2204384..2204836 (+)	453	WP_003699637.1	dUTP diphosphatase	-
NDL73_RS11610 (NDL73_02360)	dapC	2204912..2206099 (+)	1188	WP_003699639.1	succinyldiaminopimelate transaminase	-
NDL73_RS11615 (NDL73_02365)	yaaA	2206255..2207034 (+)	780	WP_003699641.1	peroxide stress protein YaaA	-
NDL73_RS11630 (NDL73_02380)	-	2207564..2208757 (+)	1194	WP_017146746.1	phage integrase central domain-containing protein	-
NDL73_RS11635 (NDL73_02385)	-	2209113..2209382 (-)	270	WP_003687928.1	hypothetical protein	-
NDL73_RS11640 (NDL73_02390)	-	2209577..2210260 (-)	684	WP_003687929.1	DUF2786 domain-containing protein	-

Sequence

Protein

• Length: 157 a.a.
• Molecular weight: 17429.25 Da
• Isoelectric Point: 9.7225

>NTDB_id=696403 NDL73_RS11590 WP_172760650.1 2202660..2203133(+) (pilL) [Neisseria gonorrhoeae strain 10268]
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNVLKQFILKNPLDDNQTIKTKLEIFVSGYKM
NPKIAKKYSVSVAFANTEKPRVYRLVGVPKAGTGYTLSVWMNSVGDGYKCRDAASAQAYSETLSANTGCEAFSNRKK

Nucleotide

• Length: 474 bp

>NTDB_id=696403 NDL73_RS11590 WP_172760650.1 2202660..2203133(+) (pilL) [Neisseria gonorrhoeae strain 10268]
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTTGTCGCGATACTCGGCATTATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATGTTCTCAAAC
AGTTTATTTTGAAAAATCCCCTGGACGATAATCAGACCATCAAGACCAAACTGGAAATATTTGTCTCAGGCTATAAGATG
AATCCGAAAATTGCCAAAAAATATAGTGTTTCGGTGGCATTTGCCAATACGGAAAAACCAAGGGTATACAGGTTGGTCGG
CGTTCCGAAGGCAGGGACGGGTTATACCTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTGATGCCG
CTTCTGCCCAGGCCTATTCGGAGACCTTGTCCGCAAATACCGGCTGTGAAGCTTTCTCTAATCGTAAAAAATAG

Domains

Predicted by InterproScan.

• Minor type IV pilin, PilX (Pilin_PilX) (31-157)

• Prokaryotic N-terminal methylation motif (N_methyl) (3-25)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilL	Neisseria gonorrhoeae MS11	91.083	100	0.911
pilX	Neisseria meningitidis 8013	88.535	100	0.885