Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NCL52_RS07795 Genome accession   NZ_CP098417
Coordinates   1494050..1494625 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain N2-10     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1489050..1499625
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NCL52_RS07765 (NCL52_07765) dapD 1489238..1489948 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NCL52_RS07770 (NCL52_07770) dapI 1490018..1491142 (+) 1125 WP_106073886.1 N-acetyldiaminopimelate deacetylase -
  NCL52_RS07775 (NCL52_07775) ykuS 1491204..1491449 (+) 246 WP_003232382.1 YkuS family protein -
  NCL52_RS07780 (NCL52_07780) mscT 1491486..1492289 (-) 804 WP_137200745.1 small-conductance mechanosensitive channel protein MscT -
  NCL52_RS07785 (NCL52_07785) ahpA 1492526..1493068 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  NCL52_RS07790 (NCL52_07790) ykuV 1493138..1493584 (+) 447 WP_134983051.1 thiol-disulfide oxidoreductase YkuV -
  NCL52_RS07795 (NCL52_07795) rok 1494050..1494625 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  NCL52_RS07800 (NCL52_07800) cse15 1494666..1495631 (-) 966 WP_076457764.1 spore protein Cse15 -
  NCL52_RS07805 (NCL52_07805) mobA 1495768..1496367 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  NCL52_RS07810 (NCL52_07810) moeB 1496418..1497437 (+) 1020 WP_128737813.1 molybdopterin-synthase adenylyltransferase MoeB -
  NCL52_RS07815 (NCL52_07815) glp 1497455..1498747 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  NCL52_RS07820 (NCL52_07820) mobB 1498708..1499229 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=695372 NCL52_RS07795 WP_003232378.1 1494050..1494625(+) (rok) [Bacillus subtilis strain N2-10]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=695372 NCL52_RS07795 WP_003232378.1 1494050..1494625(+) (rok) [Bacillus subtilis strain N2-10]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1