Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG   Type   Machinery gene
Locus tag   NBY72_RS12760 Genome accession   NZ_CP098036
Coordinates   2373440..2373814 (-) Length   124 a.a.
NCBI ID   WP_014480253.1    Uniprot ID   A0AA96ZSW7
Organism   Bacillus subtilis strain SPC-17-3     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2368440..2378814
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NBY72_RS12720 (NBY72_12720) yqhG 2368772..2369566 (+) 795 WP_014480249.1 YqhG family protein -
  NBY72_RS12725 (NBY72_12725) sinI 2369749..2369922 (+) 174 WP_003230187.1 anti-repressor SinI Regulator
  NBY72_RS12730 (NBY72_12730) sinR 2369956..2370291 (+) 336 WP_003226345.1 transcriptional regulator SinR Regulator
  NBY72_RS12735 (NBY72_12735) tasA 2370384..2371169 (-) 786 WP_014480250.1 biofilm matrix protein TasA -
  NBY72_RS12740 (NBY72_12740) sipW 2371233..2371805 (-) 573 WP_003230181.1 signal peptidase I SipW -
  NBY72_RS12745 (NBY72_12745) tapA 2371789..2372550 (-) 762 WP_014480251.1 amyloid fiber anchoring/assembly protein TapA -
  NBY72_RS12750 (NBY72_12750) yqzG 2372822..2373148 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  NBY72_RS12755 (NBY72_12755) spoIITA 2373190..2373369 (-) 180 WP_014480252.1 YqzE family protein -
  NBY72_RS12760 (NBY72_12760) comGG 2373440..2373814 (-) 375 WP_014480253.1 ComG operon protein ComGG Machinery gene
  NBY72_RS12765 (NBY72_12765) comGF 2373815..2374198 (-) 384 WP_014480254.1 ComG operon protein ComGF Machinery gene
  NBY72_RS12770 (NBY72_12770) comGE 2374224..2374571 (-) 348 WP_014480255.1 ComG operon protein 5 Machinery gene
  NBY72_RS12775 (NBY72_12775) comGD 2374555..2374986 (-) 432 WP_014480256.1 comG operon protein ComGD Machinery gene
  NBY72_RS12780 (NBY72_12780) comGC 2374976..2375272 (-) 297 WP_003230162.1 comG operon protein ComGC Machinery gene
  NBY72_RS12785 (NBY72_12785) comGB 2375286..2376323 (-) 1038 WP_031600685.1 comG operon protein ComGB Machinery gene
  NBY72_RS12790 (NBY72_12790) comGA 2376310..2377380 (-) 1071 WP_004399124.1 competence protein ComGA Machinery gene
  NBY72_RS12795 (NBY72_12795) - 2377592..2377789 (-) 198 WP_014480259.1 CBS domain-containing protein -
  NBY72_RS12800 (NBY72_12800) corA 2377791..2378744 (-) 954 WP_014480260.1 magnesium transporter CorA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14509.72 Da        Isoelectric Point: 9.2806

>NTDB_id=693755 NBY72_RS12760 WP_014480253.1 2373440..2373814(-) (comGG) [Bacillus subtilis strain SPC-17-3]
MYRTRGFIYPAVLFVSALVLLIVNFAAAQYISRCMFEKETKELYIGENLLQNGVLLSIRHVLEERKGQEGTQQFPYGRVS
YYIHDTSIKEQKEINLRVSTESGTERTAQIVFDQKQKKLLRWTE

Nucleotide


Download         Length: 375 bp        

>NTDB_id=693755 NBY72_RS12760 WP_014480253.1 2373440..2373814(-) (comGG) [Bacillus subtilis strain SPC-17-3]
ATGTATCGTACAAGAGGGTTTATTTATCCAGCTGTTCTTTTTGTGTCAGCGCTTGTGCTGTTAATCGTGAACTTTGCTGC
TGCTCAATATATTTCACGCTGCATGTTTGAAAAGGAAACAAAAGAGTTATACATAGGAGAGAATTTGCTTCAAAATGGGG
TGCTTCTTTCGATTCGGCATGTTCTAGAGGAACGGAAAGGCCAGGAGGGTACGCAGCAATTTCCATATGGACGGGTTTCT
TATTACATTCATGATACATCGATAAAAGAACAAAAAGAAATCAACTTAAGAGTGTCAACGGAGTCGGGAACAGAAAGAAC
TGCACAGATCGTATTTGATCAAAAACAGAAAAAACTGCTGAGATGGACAGAATAA

Domains

Predicted by InterproScan.

ComG operon protein 7 (ComGG)

(30-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG Bacillus subtilis subsp. subtilis str. 168

97.581

100

0.976