Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   M9H69_RS06710 Genome accession   NZ_CP097843
Coordinates   1294973..1296931 (-) Length   652 a.a.
NCBI ID   WP_250315166.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1289973..1301931
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS06700 (M9H69_06700) - 1292559..1293725 (-) 1167 WP_250315164.1 MalY/PatB family protein -
  M9H69_RS06705 (M9H69_06705) - 1293733..1294827 (-) 1095 WP_250315165.1 cystathionine gamma-synthase -
  M9H69_RS06710 (M9H69_06710) amiA 1294973..1296931 (-) 1959 WP_250315166.1 peptide ABC transporter substrate-binding protein Regulator
  M9H69_RS06715 (M9H69_06715) - 1297133..1298755 (-) 1623 WP_250315167.1 polysaccharide biosynthesis protein -
  M9H69_RS06720 (M9H69_06720) - 1298861..1300306 (+) 1446 WP_250315168.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase -
  M9H69_RS06725 (M9H69_06725) - 1300338..1300538 (-) 201 WP_000051186.1 CsbD family protein -
  M9H69_RS06730 (M9H69_06730) - 1300640..1301290 (-) 651 WP_250315169.1 DUF1803 domain-containing protein -
  M9H69_RS06735 (M9H69_06735) - 1301274..1301786 (-) 513 WP_250315170.1 YiiX/YebB-like N1pC/P60 family cysteine hydrolase -

Sequence

Protein


Download         Length: 652 a.a.        Molecular weight: 72936.00 Da        Isoelectric Point: 4.7016

>NTDB_id=692935 M9H69_RS06710 WP_250315166.1 1294973..1296931(-) (amiA) [Streptococcus oralis strain HP01]
MKKSKAKYLTLASVVLSAGILLSACGNSTSSSKTYNYVYSSDPSSLNYLAENRATTNDIVTNLVDGLMENDQYGNYVPSL
AEDWTVSQDGLTYTYKLRKDAKWYTYEGEEYAPVTAQDFVTGLKYAADKKSEALYLVQDSVAGLDDYINGKTTDFSTVGV
KAIDDQTVQYTLTRPEPYWNSKTTSTILFPVNADFLKSKGDDFAKVDPSSILYNGPFLMKSFVSKSVIEFKKNPNYWDEK
NVFVDDVKLAYYDGSDQDALARNFVEGVYSYARLYPNSSSFEGIKEKNKDNIIYSMQNATSYYLNFNLDRKSYNFTSKSS
DIEKKSTQEAVLNKNFRQAFNYAYNRTAYGAQSQGEDGATKIIRNLVVPPTFVSINGKDFGDVVSEKMVNYGQEWQGINF
ADAQDPYYNPDKAKAKFAEAKKELEAKGVQFPIHLDVSVDQSAKKGVLETSSLKQSIESVLGAENVVIDIQQLSTDDYDN
SSYLAQTAAQKDFDIYNGGWSADYLDPSSYLDILNVNNGGMLQNLGLEPGEVNDKAKAVGLDTYTQMLEEANKEQDPAKR
YEKYAEIQAWLVDSALAIPNVSQGGTPGLRKTVPFSAPFSQAGNKGVESYKYLKLQDKTVTTDEYEKAKEKWQKEKEESN
KKAQEELAKHVK

Nucleotide


Download         Length: 1959 bp        

>NTDB_id=692935 M9H69_RS06710 WP_250315166.1 1294973..1296931(-) (amiA) [Streptococcus oralis strain HP01]
ATGAAAAAGTCTAAGGCCAAGTATCTGACACTTGCAAGTGTCGTGTTAAGCGCAGGTATCTTACTGAGCGCATGTGGAAA
CTCAACTAGTTCTTCTAAAACATATAACTATGTTTATTCGAGCGATCCATCTAGTTTGAACTATCTTGCAGAAAACCGTG
CAACAACCAACGACATCGTTACTAATTTGGTAGATGGATTGATGGAAAATGACCAATACGGTAACTATGTTCCATCGTTG
GCAGAGGATTGGACTGTTTCTCAGGACGGTTTGACCTATACTTACAAATTGCGTAAGGATGCAAAATGGTATACCTATGA
GGGTGAAGAATATGCCCCCGTAACGGCGCAAGATTTTGTCACTGGGTTGAAATATGCTGCTGATAAAAAATCCGAAGCCT
TGTACCTGGTTCAAGACTCTGTAGCTGGTTTGGATGATTATATCAACGGTAAAACAACTGACTTTTCAACTGTCGGTGTT
AAGGCGATTGATGACCAAACAGTTCAGTACACTTTGACACGTCCAGAACCTTATTGGAACTCTAAAACAACTTCAACCAT
TCTCTTCCCTGTCAATGCGGACTTCCTGAAATCAAAAGGGGATGATTTTGCTAAGGTAGACCCTTCTAGTATTTTGTACA
ATGGACCTTTCTTAATGAAATCTTTTGTTTCAAAATCTGTTATCGAATTCAAGAAAAATCCCAACTACTGGGATGAAAAA
AATGTCTTTGTGGATGATGTGAAATTGGCCTATTATGATGGTAGTGACCAAGATGCACTAGCACGTAACTTTGTAGAAGG
AGTCTATAGCTACGCGCGTCTCTATCCAAATAGCTCAAGCTTTGAAGGAATTAAAGAGAAGAACAAGGATAACATCATCT
ATAGTATGCAAAATGCAACTTCTTATTACTTGAACTTCAACTTGGACAGAAAATCTTATAACTTCACTTCTAAGTCCTCT
GATATCGAAAAGAAATCAACCCAAGAAGCAGTTCTGAATAAAAACTTCCGTCAAGCCTTCAACTATGCTTATAACCGTAC
AGCCTATGGAGCACAATCACAAGGGGAGGACGGAGCAACGAAGATTATTCGTAACTTGGTTGTACCTCCTACATTTGTAA
GTATCAACGGAAAAGACTTTGGCGATGTTGTTTCAGAAAAGATGGTCAACTATGGCCAAGAATGGCAAGGAATCAATTTT
GCAGATGCGCAAGATCCATACTACAATCCTGACAAGGCTAAAGCTAAATTTGCGGAAGCCAAGAAAGAATTGGAAGCTAA
GGGTGTACAATTCCCAATCCACTTGGATGTATCTGTAGACCAATCAGCTAAAAAAGGTGTACTTGAAACGAGCTCTTTGA
AACAATCCATCGAATCTGTTCTCGGAGCTGAGAATGTGGTTATCGATATCCAACAATTATCAACAGATGACTACGATAAT
TCTAGCTACCTCGCTCAAACTGCAGCTCAAAAAGACTTTGATATCTATAATGGTGGTTGGAGTGCGGACTACTTGGATCC
ATCAAGCTATCTAGATATCCTAAATGTCAATAACGGCGGTATGTTGCAAAACCTCGGTCTAGAACCAGGTGAGGTTAATG
ACAAGGCTAAGGCAGTTGGTCTGGATACTTACACTCAAATGTTGGAAGAAGCGAACAAGGAGCAAGACCCAGCAAAACGT
TATGAAAAATATGCTGAAATTCAAGCTTGGCTCGTTGATAGCGCCCTTGCAATTCCAAACGTTTCCCAAGGTGGAACACC
TGGCTTGAGAAAGACAGTTCCATTCTCAGCGCCATTCTCACAAGCTGGAAATAAGGGTGTCGAATCATACAAATACCTCA
AGTTGCAAGATAAGACTGTAACGACTGATGAGTATGAAAAAGCTAAAGAAAAATGGCAGAAAGAAAAAGAAGAATCAAAT
AAAAAAGCCCAAGAAGAACTGGCAAAACACGTTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

56.231

100

0.567
  amiA3 Streptococcus thermophilus LMG 18311

55.842

100

0.564
  amiA3 Streptococcus thermophilus LMD-9

55.69

100

0.563