Detailed information    

insolico Bioinformatically predicted

Overview


Name   micB   Type   Regulator
Locus tag   M9H69_RS05105 Genome accession   NZ_CP097843
Coordinates   982266..983615 (+) Length   449 a.a.
NCBI ID   WP_000568719.1    Uniprot ID   -
Organism   Streptococcus oralis strain HP01     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 977266..988615
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS05080 (M9H69_05080) - 977519..978337 (+) 819 WP_250316111.1 NAD kinase -
  M9H69_RS05085 (M9H69_05085) - 978334..979230 (+) 897 WP_250316112.1 RluA family pseudouridine synthase -
  M9H69_RS05090 (M9H69_05090) pta 979274..980248 (+) 975 WP_250316113.1 phosphate acetyltransferase -
  M9H69_RS05095 (M9H69_05095) mutY 980331..981506 (+) 1176 WP_250316114.1 A/G-specific adenine glycosylase -
  M9H69_RS05100 (M9H69_05100) micA 981566..982273 (+) 708 WP_250316115.1 response regulator YycF Regulator
  M9H69_RS05105 (M9H69_05105) micB 982266..983615 (+) 1350 WP_000568719.1 cell wall metabolism sensor histidine kinase VicK Regulator
  M9H69_RS05110 (M9H69_05110) vicX 983617..984426 (+) 810 WP_001290612.1 MBL fold metallo-hydrolase Regulator
  M9H69_RS05115 (M9H69_05115) - 984459..984806 (-) 348 WP_250316116.1 thioredoxin -
  M9H69_RS05120 (M9H69_05120) - 984917..986635 (-) 1719 WP_250316117.1 phospho-sugar mutase -

Sequence


Protein


Download         Length: 449 a.a.        Molecular weight: 51621.00 Da        Isoelectric Point: 4.5796

>NTDB_id=692926 M9H69_RS05105 WP_000568719.1 982266..983615(+) (micB) [Streptococcus oralis strain HP01]
MIEDIRQTILTSDFIFILILLGFILVVTLLLLENRRDNIRLKEINQKVKDLIAGDYSQVLDLQGSTEITNITNNLNDLSE
VIRLTQENLEQESKRLNSILSYMTDGVLATNRRGQITMINDMAKKQLGVQKEDVLNKSILELLKIEDEYELRDLITQIPE
LTIDSQDVNGEYLSLRVRFALVRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALY
DPVAPDFIKVSLDETNRMMRMVTDLLHLSRIDNATTKLDIELINFTAFITFILNRFDKMRNQDEEKKYELVRDYPITSVW
IEIDTDKMTQVIDNILNNAIKYSPDGGKITVSMKTTDDQMILSISDQGLGIPKQDLPRIFDRFYRVDRARSRAQGGTGLG
LAIAKEIIKQHNGFIWAKSEYGKGSTFTIVLPYDKDAVKEEIWEDEIED

Nucleotide


Download         Length: 1350 bp        

>NTDB_id=692926 M9H69_RS05105 WP_000568719.1 982266..983615(+) (micB) [Streptococcus oralis strain HP01]
ATGATTGAAGATATTAGACAAACTATTCTGACCAGTGATTTTATCTTTATCCTGATTTTACTTGGCTTTATCCTGGTGGT
GACCTTGCTCTTACTGGAAAATCGTCGGGATAATATCCGTCTGAAGGAGATAAATCAAAAGGTTAAGGACTTGATTGCAG
GTGATTATTCTCAAGTTTTGGACTTGCAAGGAAGTACAGAAATCACCAATATCACCAATAATCTAAACGATTTGTCAGAA
GTTATTCGTTTGACCCAAGAAAATCTGGAACAAGAGAGTAAACGATTGAACAGTATTCTTTCTTATATGACTGATGGCGT
CCTTGCGACTAATCGCCGTGGCCAGATTACCATGATCAACGATATGGCAAAGAAACAGCTCGGTGTGCAGAAAGAAGATG
TTCTTAATAAAAGCATCCTCGAATTGCTTAAGATAGAAGATGAGTATGAGCTGCGTGACCTGATTACACAGATTCCAGAG
TTGACGATTGACTCCCAGGATGTAAATGGGGAATACCTGAGCCTTCGTGTACGTTTTGCTCTGGTTCGTCGTGAGTCAGG
TTTCATCTCTGGTTTGGTTGCCGTTTTACATGATACGACCGAGCAAGAGAAGGAAGAGCGTGAGCGAAGACTCTTTGTTT
CGAATGTCAGTCATGAGTTGCGTACTCCTTTGACCAGTGTTAAATCTTATCTCGAAGCCTTGGATGAGGGAGCTCTGTAT
GATCCTGTCGCCCCTGATTTTATTAAGGTCTCACTCGATGAAACCAACCGTATGATGCGTATGGTGACAGATCTCTTGCA
TCTATCTCGTATTGACAATGCGACTACTAAACTGGATATAGAGTTGATTAACTTTACAGCCTTTATCACCTTCATCCTCA
ACCGTTTTGATAAGATGAGAAATCAGGATGAAGAGAAAAAATATGAGCTAGTGAGAGATTATCCAATAACTTCAGTTTGG
ATTGAGATTGATACGGATAAGATGACCCAGGTGATTGATAATATTCTTAACAATGCCATCAAGTATTCACCAGATGGTGG
GAAGATTACGGTTAGCATGAAAACCACGGATGACCAGATGATTTTATCAATTTCTGACCAGGGTCTTGGGATTCCAAAAC
AAGATTTGCCTAGGATTTTTGACCGCTTTTACCGTGTGGATCGCGCAAGAAGTCGTGCTCAAGGTGGGACTGGTCTAGGT
CTGGCTATCGCGAAAGAAATCATCAAACAACACAATGGTTTTATTTGGGCAAAAAGCGAATACGGTAAGGGCTCAACCTT
TACCATAGTGCTCCCTTATGATAAGGATGCCGTAAAAGAAGAAATATGGGAGGACGAAATAGAAGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  micB Streptococcus pneumoniae Cp1015

89.294

97.773

0.873

  vicK Streptococcus mutans UA159

70.398

89.532

0.63