Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   STO1_RS08475 Genome accession   NZ_AP018338
Coordinates   1663119..1664129 (-) Length   336 a.a.
NCBI ID   WP_084853082.1    Uniprot ID   A0A1X1GT10
Organism   Streptococcus oralis subsp. tigurinus strain osk_001     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1658119..1669129
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STO1_RS08465 (STO1_016230) - 1660644..1662038 (-) 1395 WP_045616504.1 Cof-type HAD-IIB family hydrolase -
  STO1_RS08470 (STO1_016240) - 1662104..1663066 (+) 963 WP_084853081.1 asparaginase -
  STO1_RS08475 (STO1_016250) ccpA 1663119..1664129 (-) 1011 WP_084853082.1 catabolite control protein A Regulator
  STO1_RS08480 (STO1_016260) - 1664338..1664655 (+) 318 WP_000886045.1 DUF960 domain-containing protein -
  STO1_RS08485 (STO1_016270) - 1664706..1665989 (-) 1284 WP_084853083.1 hypothetical protein -
  STO1_RS08490 (STO1_016280) folK 1665982..1666803 (-) 822 WP_084853084.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  STO1_RS08495 (STO1_016290) folE 1666846..1667400 (-) 555 WP_000380916.1 GTP cyclohydrolase I FolE -
  STO1_RS08500 (STO1_016300) - 1667404..1668705 (-) 1302 WP_096422820.1 bifunctional folylpolyglutamate synthase/dihydrofolate synthase -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37202.26 Da        Isoelectric Point: 5.3237

>NTDB_id=69083 STO1_RS08475 WP_084853082.1 1663119..1664129(-) (ccpA) [Streptococcus oralis subsp. tigurinus strain osk_001]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
TLAKGIDDIAEMYKYNIVLANSDEDDEKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATIDAVSYLLKENEKIAFVSGPLVDDINGKVRLIGYKEALKKAGIPYSEGLVFESKYSYDDGYALAERLISSQ
ATAAVVTGDELAAGVLNGLADHGVSVPEEFEIITSDDSQISRFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERRSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=69083 STO1_RS08475 WP_084853082.1 1663119..1664129(-) (ccpA) [Streptococcus oralis subsp. tigurinus strain osk_001]
ATGAACACAGATGATACAGTAACGATTTATGACGTCGCCCGTGAAGCAGGAGTTTCAATGGCAACAGTTAGCCGTGTCGT
TAATGGCAACAAGAATGTTAAAGAGAACACTCGAAAAAAAGTCCTAGAAGTGATTGATCGCTTGGACTATCGTCCAAATG
CGGTAGCCCGTGGTTTAGCTAGCAAGAAAACAACGACAGTCGGAGTTGTGATCCCTAACATTACCAATGGTTATTTCTCA
ACGCTTGCTAAGGGGATTGACGACATTGCTGAAATGTACAAGTATAACATTGTCCTTGCAAATAGTGATGAGGATGATGA
AAAGGAAGTTTCAGTGGTTAACACTCTCTTTTCAAAACAAGTCGATGGGATTATCTTTATGGGCTATCACTTGACTGAAA
AGATTCGTTCAGAATTTTCTCGTTCACGGACACCGGTTGTTCTTGCTGGTACTGTGGATGTCGAACATCAACTTCCAAGT
GTAAATATCGACTACAAACAAGCAACGATTGATGCCGTGAGCTACCTTCTCAAAGAAAACGAAAAAATTGCTTTTGTGAG
TGGACCACTTGTCGATGATATCAATGGCAAGGTTCGTTTGATCGGTTACAAGGAAGCCTTGAAAAAAGCAGGAATCCCTT
ATAGCGAGGGATTGGTCTTTGAATCAAAATACAGCTATGACGATGGCTATGCCTTGGCAGAACGCTTGATTTCATCACAA
GCTACAGCCGCAGTTGTAACAGGCGATGAATTGGCAGCAGGTGTCCTAAATGGTTTGGCTGACCACGGTGTGTCTGTGCC
GGAAGAGTTTGAAATCATTACTAGTGATGATTCACAAATCTCACGCTTTACCCGTCCAAACTTGACAACTATTGCCCAAC
CTCTTTATGACCTTGGTGCCATCAGTATGCGTATGTTGACGAAGATTATGCACAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCTTGCCTCATGGTTTGACAGAGCGTCGTTCAACACGAAAACGGAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1X1GT10

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

95.238

100

0.952

  ccpA Streptococcus gordonii str. Challis substr. CH1

88.922

99.405

0.884

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

58.006

98.512

0.571


Multiple sequence alignment