Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   STO1_RS01325 Genome accession   NZ_AP018338
Coordinates   255352..255975 (+) Length   207 a.a.
NCBI ID   WP_007520749.1    Uniprot ID   A0A1X1GJV9
Organism   Streptococcus oralis subsp. tigurinus strain osk_001     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 250352..260975
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STO1_RS01315 (STO1_002570) rpoC 251022..254687 (+) 3666 WP_007520751.1 DNA-directed RNA polymerase subunit beta' -
  STO1_RS01320 (STO1_002580) ndk 254796..255215 (+) 420 WP_007520750.1 nucleoside-diphosphate kinase -
  STO1_RS01325 comM 255352..255975 (+) 624 WP_007520749.1 hypothetical protein Regulator
  STO1_RS01330 (STO1_002590) tsaE 256061..256504 (+) 444 WP_007520747.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  STO1_RS01335 (STO1_002600) - 256494..257015 (+) 522 WP_021164629.1 GNAT family N-acetyltransferase -
  STO1_RS01340 (STO1_002610) brpA 257020..258060 (+) 1041 WP_061588622.1 biofilm formation/cell division transcriptional regulator BrpA -
  STO1_RS01345 (STO1_002620) cinA 258134..259390 (+) 1257 WP_096421635.1 competence/damage-inducible protein A Machinery gene
  STO1_RS01350 (STO1_002630) recA 259445..260596 (+) 1152 WP_096421637.1 recombinase RecA Machinery gene

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23655.49 Da        Isoelectric Point: 9.6694

>NTDB_id=69036 STO1_RS01325 WP_007520749.1 255352..255975(+) (comM) [Streptococcus oralis subsp. tigurinus strain osk_001]
MMKSIRVLLLLAVAQILFGSCLLWKESFLSLREGNVYFLILIVGVSGFCAGINYFHTLGQKSHSILRVQKKVSLVYSLLL
VVNLLATCLVLTESIQTTSKLQQDLVDLFLPSFFFLLGVDLWIFLPFDKYIRDMDNHLNKKRTVVISVLGTIIFLRNPVT
ISSILLYIGLGFLCARFLFPKSVQREISFYGHVIRDVLFVICIFTFF

Nucleotide


Download         Length: 624 bp        

>NTDB_id=69036 STO1_RS01325 WP_007520749.1 255352..255975(+) (comM) [Streptococcus oralis subsp. tigurinus strain osk_001]
ATGATGAAATCAATTCGTGTTTTATTATTATTAGCTGTCGCTCAAATTTTATTTGGAAGTTGTTTATTGTGGAAGGAATC
ATTTTTATCTTTAAGAGAAGGAAATGTCTATTTTTTAATTCTCATAGTGGGAGTTTCAGGCTTTTGTGCCGGGATTAATT
ACTTCCATACCTTGGGTCAGAAAAGTCATAGTATTTTGCGTGTTCAAAAGAAAGTAAGCCTTGTTTATAGCCTTCTTTTA
GTAGTCAATCTTCTGGCAACCTGTCTGGTTCTCACAGAAAGCATCCAAACTACTAGCAAATTGCAGCAGGATCTGGTTGA
CCTCTTTTTGCCTTCATTCTTTTTCTTGCTGGGAGTAGATCTATGGATTTTCTTACCTTTTGATAAATATATTCGGGATA
TGGACAACCATCTGAACAAGAAGAGAACGGTTGTGATTTCCGTTTTAGGCACGATTATTTTCTTGAGAAATCCCGTAACA
ATCTCCTCCATTCTCCTTTATATCGGTCTCGGTTTTTTATGTGCGCGTTTCCTCTTTCCAAAATCCGTGCAAAGGGAAAT
TTCATTTTATGGACATGTGATTCGCGATGTTTTATTTGTTATTTGTATTTTTACCTTTTTCTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X1GJV9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

51.942

99.517

0.517
  comM Streptococcus pneumoniae R6

51.942

99.517

0.517
  comM Streptococcus pneumoniae TIGR4

51.942

99.517

0.517
  comM Streptococcus mitis NCTC 12261

40.609

95.169

0.386
  comM Streptococcus mitis SK321

39.594

95.169

0.377

Multiple sequence alignment