Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   M8286_RS03020 Genome accession   NZ_CP097577
Coordinates   609267..610070 (+) Length   267 a.a.
NCBI ID   WP_024407014.1    Uniprot ID   A0A123TQ59
Organism   Streptococcus suis strain 3112     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 604267..615070
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M8286_RS02995 (M8286_03015) - 604696..605394 (-) 699 WP_275601431.1 amino acid ABC transporter permease -
  M8286_RS03000 (M8286_03020) - 605409..606248 (-) 840 WP_275601432.1 transporter substrate-binding domain-containing protein -
  M8286_RS03005 (M8286_03025) - 606259..607020 (-) 762 WP_002935839.1 amino acid ABC transporter ATP-binding protein -
  M8286_RS03010 (M8286_03030) micA 607214..607918 (+) 705 WP_004298854.1 response regulator YycF Regulator
  M8286_RS03015 (M8286_03035) micB 607911..609260 (+) 1350 WP_024379730.1 cell wall metabolism sensor histidine kinase VicK Regulator
  M8286_RS03020 (M8286_03040) vicX 609267..610070 (+) 804 WP_024407014.1 MBL fold metallo-hydrolase Regulator
  M8286_RS03025 (M8286_03045) pbp2b 610605..612680 (+) 2076 WP_275601433.1 penicillin-binding protein PBP2B -
  M8286_RS03030 (M8286_03050) recR 612689..613285 (+) 597 WP_002935848.1 recombination mediator RecR -
  M8286_RS03035 (M8286_03055) - 613390..614436 (+) 1047 WP_358639055.1 D-alanine--D-alanine ligase -
  M8286_RS03040 (M8286_03060) - 614524..614904 (+) 381 WP_275601435.1 OsmC family protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29633.71 Da        Isoelectric Point: 5.7755

>NTDB_id=690330 M8286_RS03020 WP_024407014.1 609267..610070(+) (vicX) [Streptococcus suis strain 3112]
MIGKGFNYSILASGSSGNCFYLETDKKKILVDAGLSGKKITSLLAEIDRKPEDIDAILVTHEHSDHIHGIGVLARKYGMD
IYANELTWQAMESKLGKIDVAQKHIFELGAMKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMVGIV
ENADAYLIESNHDIEILRSGSYSWNLKQRILSDKGHLCNEDGADAMIRSLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLGVGVDFQVYDTSPDTATALTKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=690330 M8286_RS03020 WP_024407014.1 609267..610070(+) (vicX) [Streptococcus suis strain 3112]
ATGATCGGAAAAGGTTTTAATTATAGTATTTTAGCTTCGGGGTCCAGCGGGAATTGTTTTTACCTGGAAACAGATAAAAA
GAAAATCTTAGTGGATGCTGGCTTATCAGGGAAAAAGATTACCAGTCTTTTGGCGGAAATTGACCGAAAGCCTGAGGATA
TTGATGCTATCCTGGTAACGCATGAACATAGCGATCACATCCATGGTATCGGTGTTTTAGCACGTAAGTATGGGATGGAT
ATTTATGCCAATGAGTTGACCTGGCAGGCTATGGAGAGCAAATTGGGCAAGATTGATGTGGCTCAAAAACATATCTTCGA
ATTGGGGGCTATGAAGACTTTTGGCGACCTAGACATTGAGTCCTTTGGAGTCAGCCATGATGCTGCATGTCCGCAATTTT
ACCGTTTTATGAAGGATGACAAATCCTTTGTTATGTTGACGGATACAGGCTATGTCAGTGACCGCATGGTTGGAATTGTA
GAAAATGCCGATGCTTATTTGATTGAATCGAACCATGATATTGAAATTTTGCGCTCAGGTTCTTATTCATGGAATTTGAA
GCAACGAATTCTATCCGATAAGGGCCATCTTTGTAACGAAGATGGAGCTGATGCCATGATTCGCTCGCTTGGAAATCGGA
CCAAAAAGATTTACCTAGGGCATTTGTCAAAGGAAAACAATATCAAGGAATTGGCTCACATGACCATGGTTAATCAGTTG
GCGCAGGCTGATTTAGGAGTTGGAGTAGATTTCCAAGTCTATGATACATCGCCAGATACAGCGACTGCCTTGACCAAGAT
TTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A123TQ59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.779

100

0.768