Detailed information
Bioinformatically predicted
Overview
| Name | comP | Type | Machinery gene |
| Locus tag | HT085_RS08290 | Genome accession | NZ_AP023069 |
| Coordinates | 1580566..1581015 (-) | Length | 149 a.a. |
| NCBI ID | WP_002214937.1 | Uniprot ID | Q9JXJ2 |
| Organism | Neisseria gonorrhoeae strain TUM19854 | ||
| Function | DNA binding; DNA uptake; receptor of DNA uptake sequence (DUS) (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1575566..1586015
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HT085_RS08265 (TUM19854C_15910) | - | 1576613..1577035 (-) | 423 | WP_003691751.1 | very short patch repair endonuclease | - |
| HT085_RS11915 (TUM19854C_15920) | - | 1577041..1577637 (-) | 597 | WP_012503916.1 | TIGR02391 family protein | - |
| HT085_RS11920 (TUM19854C_15930) | - | 1577827..1578684 (-) | 858 | WP_012503917.1 | ATP-binding protein | - |
| HT085_RS08275 (TUM19854C_15940) | - | 1578698..1579027 (-) | 330 | WP_002234365.1 | DNA cytosine methyltransferase | - |
| HT085_RS08280 | - | 1579066..1579674 (-) | 609 | WP_080229275.1 | DNA cytosine methyltransferase | - |
| HT085_RS08290 (TUM19854C_15950) | comP | 1580566..1581015 (-) | 450 | WP_002214937.1 | type IV pilin protein | Machinery gene |
| HT085_RS08295 (TUM19854C_15960) | comE | 1581103..1581498 (-) | 396 | WP_003703428.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| HT085_RS11925 | - | 1581600..1581719 (-) | 120 | Protein_1613 | competence protein ComE | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16834.81 Da Isoelectric Point: 9.7951
>NTDB_id=68981 HT085_RS08290 WP_002214937.1 1580566..1581015(-) (comP) [Neisseria gonorrhoeae strain TUM19854]
MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRAALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEG
FCIRLNGIARGALDSKFMLKAVAIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK
MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRAALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEG
FCIRLNGIARGALDSKFMLKAVAIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK
Nucleotide
Download Length: 450 bp
>NTDB_id=68981 HT085_RS08290 WP_002214937.1 1580566..1581015(-) (comP) [Neisseria gonorrhoeae strain TUM19854]
ATGACTGATAATCGGGGGTTTACGCTGGTTGAATTAATATCAGTGGTCTTGATATTGTCTGTACTTGCTTTAATTGTTTA
TCCGAGCTATCGCAATTATGTTGAGAAAGCAAAGATAAATGCAGTGCGGGCAGCCTTGTTAGAAAATGCACATTTTATGG
AAAAGTTTTATCTGCAGAATGGGAGATTTAAACAAACATCTACCAAATGGCCAAGTTTGCCGATTAAAGAGGCAGAAGGC
TTTTGTATCCGTTTGAATGGAATCGCGCGCGGGGCTTTAGACAGTAAATTCATGTTGAAGGCGGTAGCCATAGATAAAGA
TAAAAATCCTTTTATTATTAAGATGAATGAAAATCTAGTAACCTTTATTTGCAAGAAGTCCGCCAGTTCGTGTAGTGACG
GGCTGGATTATTTTAAAGGAAATGATAAGGACTGCAAGTTACTTAAGTAG
ATGACTGATAATCGGGGGTTTACGCTGGTTGAATTAATATCAGTGGTCTTGATATTGTCTGTACTTGCTTTAATTGTTTA
TCCGAGCTATCGCAATTATGTTGAGAAAGCAAAGATAAATGCAGTGCGGGCAGCCTTGTTAGAAAATGCACATTTTATGG
AAAAGTTTTATCTGCAGAATGGGAGATTTAAACAAACATCTACCAAATGGCCAAGTTTGCCGATTAAAGAGGCAGAAGGC
TTTTGTATCCGTTTGAATGGAATCGCGCGCGGGGCTTTAGACAGTAAATTCATGTTGAAGGCGGTAGCCATAGATAAAGA
TAAAAATCCTTTTATTATTAAGATGAATGAAAATCTAGTAACCTTTATTTGCAAGAAGTCCGCCAGTTCGTGTAGTGACG
GGCTGGATTATTTTAAAGGAAATGATAAGGACTGCAAGTTACTTAAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comP | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comP | Neisseria meningitidis 8013 |
99.329 |
100 |
0.993 |
| comP | Neisseria subflava NJ9703 |
49.66 |
98.658 |
0.49 |