Detailed information NTG0689787

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: OTU47_RS04130
• Genome accession: NZ_CP113115
• Coordinates: 770480..771391 (+)
• Length: 303 a.a.
• NCBI ID: WP_000904830.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain NP2
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 765480..776391

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OTU47_RS04100 (OTU47_04100)	-	765900..766193 (+)	294	WP_000977367.1	hypothetical protein	-
OTU47_RS04105 (OTU47_04105)	-	766349..767563 (+)	1215	WP_000666472.1	pyridoxal phosphate-dependent aminotransferase	-
OTU47_RS04110 (OTU47_04110)	rpmH	767708..767842 (+)	135	WP_000831905.1	50S ribosomal protein L34	-
OTU47_RS04115 (OTU47_04115)	-	768051..768770 (+)	720	Protein_780	DUF1542 domain-containing protein	-
OTU47_RS04120 (OTU47_04120)	-	769075..769848 (+)	774	WP_000575616.1	TatD family hydrolase	-
OTU47_RS04125 (OTU47_04125)	rnmV	769848..770408 (+)	561	WP_000660013.1	ribonuclease M5	-
OTU47_RS04130 (OTU47_04130)	comR	770480..771391 (+)	912	WP_000904830.1	helix-turn-helix domain-containing protein	Regulator
OTU47_RS04135 (OTU47_04135)	-	771711..772007 (+)	297	WP_000815394.1	lactococcin 972 family bacteriocin	-
OTU47_RS04140 (OTU47_04140)	-	772084..774114 (+)	2031	WP_000825251.1	bacteriocin-associated integral membrane family protein	-
OTU47_RS04145 (OTU47_04145)	-	774116..774757 (+)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
OTU47_RS04150 (OTU47_04150)	-	774750..775058 (+)	309	WP_000333257.1	hypothetical protein	-
OTU47_RS04155 (OTU47_04155)	rsmA	775189..776061 (+)	873	WP_050117944.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-

Sequence

Protein

• Length: 303 a.a.
• Molecular weight: 35425.73 Da
• Isoelectric Point: 4.5727

>NTDB_id=689787 OTU47_RS04130 WP_000904830.1 770480..771391(+) (comR) [Streptococcus pneumoniae strain NP2]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIEDLFYEQLPNEEKVWFEATRATIDVIRSGRPEYGETVLDDYFKTIYDKELFLINELEV
INLYFAIVLTKIKQGQNQIEEINRIHSFLVRLTNHVELIASEYLFALSNTLFSGLACLDNLSSYDSLGAYIFSLNHIMEK
TQDFQKKPIILMLEWKLSLIINNDYVSAEQFYQKSKLFADIIENSYLVTMLEKQWQEDLKKYL

Nucleotide

• Length: 912 bp

>NTDB_id=689787 OTU47_RS04130 WP_000904830.1 770480..771391(+) (comR) [Streptococcus pneumoniae strain NP2]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATAGAGGATTTATTTTA
TGAGCAACTTCCTAATGAGGAAAAAGTATGGTTTGAAGCTACTAGAGCAACGATAGATGTTATTCGAAGTGGACGACCAG
AATACGGGGAAACCGTACTGGACGATTATTTTAAAACAATTTATGATAAGGAATTGTTTTTGATAAATGAATTAGAAGTT
ATCAACTTATATTTTGCTATAGTGCTTACAAAGATAAAACAAGGTCAAAATCAGATTGAAGAAATTAACAGAATTCATTC
GTTTTTAGTTCGTTTGACAAATCATGTAGAATTAATTGCATCAGAATATCTGTTTGCTTTAAGTAACACTTTGTTTTCGG
GTCTAGCCTGTTTGGATAACTTGTCGTCTTATGATTCACTAGGAGCTTATATCTTTAGCCTTAATCATATAATGGAAAAA
ACACAAGATTTTCAGAAGAAACCAATTATATTAATGTTGGAGTGGAAATTATCTCTAATAATAAACAATGATTATGTTTC
TGCCGAACAGTTCTATCAGAAATCGAAGCTATTTGCTGATATAATAGAAAATTCTTATTTAGTTACTATGTTAGAAAAAC
AATGGCAAGAAGATTTAAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-295)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	39.189	97.69	0.383
comR	Streptococcus pyogenes MGAS8232	37.5	100	0.376
comR	Streptococcus suis P1/7	37.966	97.36	0.37
comR	Streptococcus suis 05ZYH33	37.966	97.36	0.37