Detailed information NTG0689286

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: M5E03_RS16475
• Genome accession: NZ_CP097374
• Coordinates: 3180649..3181824 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus safensis strain AHB11
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3175649..3186824

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M5E03_RS16445 (M5E03_16445)	-	3175818..3176237 (-)	420	WP_034281098.1	TIGR03826 family flagellar region protein	-
M5E03_RS16450 (M5E03_16450)	comFC	3176294..3176950 (-)	657	WP_252049847.1	ComF family protein	Machinery gene
M5E03_RS16455 (M5E03_16455)	-	3176977..3177270 (-)	294	WP_024423623.1	late competence development ComFB family protein	-
M5E03_RS16460 (M5E03_16460)	comFA	3177319..3178716 (-)	1398	WP_157840122.1	DEAD/DEAH box helicase	Machinery gene
M5E03_RS16465 (M5E03_16465)	-	3178837..3179679 (-)	843	WP_024423625.1	DegV family protein	-
M5E03_RS16470 (M5E03_16470)	degU	3179895..3180584 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
M5E03_RS16475 (M5E03_16475)	degS	3180649..3181824 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
M5E03_RS16480 (M5E03_16480)	-	3182045..3182713 (+)	669	WP_012011434.1	YigZ family protein	-
M5E03_RS16485 (M5E03_16485)	-	3182698..3183789 (+)	1092	WP_034281103.1	LCP family protein	-
M5E03_RS16490 (M5E03_16490)	-	3183825..3184892 (-)	1068	WP_024423627.1	glycosyltransferase family 4 protein	-
M5E03_RS16495 (M5E03_16495)	tuaH	3185027..3186223 (-)	1197	WP_041108506.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=689286 M5E03_RS16475 WP_003213166.1 3180649..3181824(-) (degS) [Bacillus safensis strain AHB11]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=689286 M5E03_RS16475 WP_003213166.1 3180649..3181824(-) (degS) [Bacillus safensis strain AHB11]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAACAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAACCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAACTGAGAGAAAGAAGAGACGATCTGGAAAGACGGTTATTAAGTTTACAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGTCAGATTACAGTGGTTCTCAACTATCTCAACCAGGATTTACGCCAGGTCGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGTCTCAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGTTTTAAAGAAATTAGAAGTCTCAGACAGAATGTTCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCAATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAGCATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTAAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841