Detailed information    

insolico Bioinformatically predicted

Overview

Name   exbB   Type   Machinery gene
Locus tag   OSV63_RS18150 Genome accession   NZ_CP113078
Coordinates   3746662..3747297 (+) Length   211 a.a.
NCBI ID   WP_000264044.1    Uniprot ID   A0A0D5YJ84
Organism   Acinetobacter baumannii strain AB5075     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3741662..3752297
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSV63_RS18125 (OSV63_18125) - 3742502..3743515 (+) 1014 WP_001096103.1 aminoglycoside phosphotransferase family protein -
  OSV63_RS18130 (OSV63_18130) murU 3743515..3744204 (+) 690 WP_000646460.1 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU -
  OSV63_RS18135 (OSV63_18135) rsmG 3744292..3744924 (+) 633 WP_000553193.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  OSV63_RS18140 (OSV63_18140) - 3744946..3745728 (+) 783 WP_000057212.1 ParA family protein -
  OSV63_RS18145 (OSV63_18145) - 3745725..3746612 (+) 888 WP_000023429.1 ParB/RepB/Spo0J family partition protein -
  OSV63_RS18150 (OSV63_18150) exbB 3746662..3747297 (+) 636 WP_000264044.1 MotA/TolQ/ExbB proton channel family protein Machinery gene
  OSV63_RS18155 (OSV63_18155) - 3747313..3747741 (+) 429 WP_000669684.1 ExbD/TolR family protein -
  OSV63_RS18160 (OSV63_18160) msbA 3747738..3749465 (+) 1728 WP_001070729.1 lipid A export permease/ATP-binding protein MsbA -
  OSV63_RS18165 (OSV63_18165) lpxK 3749468..3750478 (+) 1011 WP_000050479.1 tetraacyldisaccharide 4'-kinase -
  OSV63_RS18170 (OSV63_18170) kdsB 3750488..3751249 (+) 762 WP_000680692.1 3-deoxy-manno-octulosonate cytidylyltransferase -
  OSV63_RS18175 (OSV63_18175) - 3751261..3752241 (+) 981 WP_001075416.1 DNA polymerase III subunit delta' -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23254.21 Da        Isoelectric Point: 6.4861

>NTDB_id=689284 OSV63_RS18150 WP_000264044.1 3746662..3747297(+) (exbB) [Acinetobacter baumannii strain AB5075]
MWELVKAGGWLMLPLILCSILTVAISIERFVRLRRSQVLPKVLMNDVSADISVVITNLEQDTNAQSTALGNILKAGFEHQ
EHGEQFARAQMEAMASQEISYLEKNINFLGTLSAIAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVG
MLIAIPALISYRYFQRVVQDYIAELEQQSTLFHASLFYKRSSIMQEHRRVG

Nucleotide


Download         Length: 636 bp        

>NTDB_id=689284 OSV63_RS18150 WP_000264044.1 3746662..3747297(+) (exbB) [Acinetobacter baumannii strain AB5075]
ATGTGGGAACTTGTGAAAGCGGGCGGCTGGTTAATGCTGCCTTTAATTTTGTGTTCAATTTTAACCGTCGCAATTAGTAT
TGAGCGTTTTGTACGTTTAAGACGTTCACAAGTTTTACCTAAAGTACTAATGAATGATGTCAGTGCAGATATTTCTGTTG
TCATAACAAATTTGGAACAGGATACTAATGCGCAAAGCACGGCATTGGGCAATATTCTAAAAGCTGGTTTTGAGCATCAG
GAACATGGCGAACAATTTGCTCGAGCACAAATGGAAGCTATGGCTTCTCAAGAAATCTCTTATTTAGAAAAAAATATTAA
CTTCTTAGGGACCTTAAGTGCTATAGCGCCTCTACTAGGGCTGCTTGGAACAGTTGTGGGAATTATTGAGTCTTTTTTGG
TTATTGATTTTGGTTCGGCAGGTAGTCCTAGTTTAATGATTCCCGGTATTTCCAAGGCTTTGATCACAACAGCAGTTGGT
ATGCTCATTGCAATTCCTGCACTTATTTCCTATCGATATTTTCAAAGAGTAGTGCAAGATTATATTGCTGAGTTAGAGCA
ACAATCGACGCTATTTCATGCCTCATTGTTTTACAAACGTTCTTCAATCATGCAAGAACATCGCCGCGTTGGTTGA

Domains

Predicted by InterProScan.

MotA/TolQ/ExbB proton channel family (MotA_ExbB)

(67-186)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D5YJ84

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  exbB Pseudomonas stutzeri DSM 10701

43.979

90.521

0.398