Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   M5E03_RS04430 Genome accession   NZ_CP097374
Coordinates   876284..877075 (+) Length   263 a.a.
NCBI ID   WP_252050268.1    Uniprot ID   -
Organism   Bacillus safensis strain AHB11     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 871284..882075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5E03_RS04395 (M5E03_04395) - 871371..871919 (+) 549 WP_252050265.1 thioredoxin family protein -
  M5E03_RS04400 (M5E03_04400) - 872253..872720 (+) 468 WP_252050266.1 thiol-disulfide oxidoreductase DCC family protein -
  M5E03_RS04405 (M5E03_04405) - 872757..874013 (-) 1257 WP_070326756.1 transcriptional regulator -
  M5E03_RS04410 (M5E03_04410) - 874288..874875 (+) 588 WP_061110587.1 nitroreductase family protein -
  M5E03_RS04415 (M5E03_04415) - 874914..875069 (-) 156 WP_024425223.1 YfhD family protein -
  M5E03_RS04420 (M5E03_04420) - 875131..875241 (-) 111 WP_017358836.1 YfhE family protein -
  M5E03_RS04425 (M5E03_04425) - 875294..876190 (-) 897 WP_252050267.1 TIGR01777 family oxidoreductase -
  M5E03_RS04430 (M5E03_04430) recX 876284..877075 (+) 792 WP_252050268.1 recombination regulator RecX Regulator
  M5E03_RS04435 (M5E03_04435) - 877079..877393 (+) 315 WP_251232603.1 YfhH family protein -
  M5E03_RS04440 (M5E03_04440) - 877619..877792 (-) 174 WP_008360604.1 YpzG family protein -
  M5E03_RS04445 (M5E03_04445) - 877818..877967 (-) 150 WP_003217849.1 small, acid-soluble spore protein K -
  M5E03_RS04450 (M5E03_04450) - 878084..878356 (+) 273 WP_024425219.1 YfhJ family protein -
  M5E03_RS04455 (M5E03_04455) - 878657..879640 (+) 984 WP_081124119.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30621.11 Da        Isoelectric Point: 6.9991

>NTDB_id=689238 M5E03_RS04430 WP_252050268.1 876284..877075(+) (recX) [Bacillus safensis strain AHB11]
MPYITKISAQKNNTERVNIFLDEKYAFSVDLDVLVQHDLKKGKELDEADIIEIQFGDSVKKGFQQAVDYLSYRMRSVKEV
TDYLTKKEIPAPAISEIIHKLKHYKYVNDLEFAEAYVSTHRKTNSKGPSVLKKELKLKGIDDDTIEQALSQYPDDLQLEE
AVKQVLKLVKKEKNRSAKEIEQRIKLQLKRKGFSFEIIDKALQEAYDGQEEEKEEEALLYMLEKAKRKVGYDGSFEKKMK
VKQFLFRKGFDLDTIDHVLDKGD

Nucleotide


Download         Length: 792 bp        

>NTDB_id=689238 M5E03_RS04430 WP_252050268.1 876284..877075(+) (recX) [Bacillus safensis strain AHB11]
ATGCCCTATATTACAAAAATTTCTGCTCAGAAAAACAATACAGAGCGGGTCAACATCTTTCTTGATGAAAAGTACGCCTT
TAGCGTTGATTTAGATGTGCTCGTCCAGCACGATTTGAAAAAAGGAAAAGAGTTGGACGAAGCAGATATCATTGAGATTC
AATTCGGTGATTCGGTGAAAAAAGGATTTCAGCAGGCCGTTGATTATTTATCCTACCGAATGAGATCAGTAAAAGAAGTC
ACCGATTATTTAACGAAAAAAGAAATCCCTGCACCTGCTATTAGTGAAATTATACACAAATTAAAGCATTATAAGTATGT
AAATGATCTTGAATTTGCAGAAGCCTATGTCAGCACCCACCGGAAAACGAACAGCAAAGGACCGTCCGTCCTAAAAAAAG
AATTGAAGCTCAAGGGGATAGACGATGACACGATTGAACAGGCGCTGTCTCAATACCCTGATGACCTACAGCTGGAGGAA
GCGGTAAAGCAGGTTCTCAAACTTGTCAAAAAAGAAAAAAATCGTTCTGCAAAAGAGATCGAGCAGCGCATCAAGCTGCA
GCTGAAGCGAAAGGGATTTTCGTTTGAGATCATTGATAAAGCCCTTCAAGAAGCCTATGATGGACAAGAAGAGGAAAAGG
AAGAAGAAGCCCTCCTTTATATGCTGGAGAAGGCAAAACGCAAGGTAGGATATGACGGATCATTTGAAAAGAAGATGAAG
GTGAAGCAATTTTTATTCAGAAAAGGCTTTGATCTCGATACAATTGATCACGTTTTAGACAAAGGGGATTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

64.093

98.479

0.631