Detailed information NTG0689225

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: M5E02_RS16820
• Genome accession: NZ_CP097373
• Coordinates: 3247503..3248678 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus safensis strain AHB2
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3242503..3253678

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M5E02_RS16790 (M5E02_16790)	-	3242671..3243090 (-)	420	WP_039181808.1	TIGR03826 family flagellar region protein	-
M5E02_RS16795 (M5E02_16795)	-	3243147..3243803 (-)	657	WP_252056805.1	ComF family protein	-
M5E02_RS16800 (M5E02_16800)	-	3243830..3244123 (-)	294	WP_041088040.1	competence protein ComFB	-
M5E02_RS16805 (M5E02_16805)	comFA	3244173..3245570 (-)	1398	WP_286037374.1	DEAD/DEAH box helicase	Machinery gene
M5E02_RS16810 (M5E02_16810)	-	3245691..3246533 (-)	843	WP_252056807.1	DegV family protein	-
M5E02_RS16815 (M5E02_16815)	degU	3246749..3247438 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
M5E02_RS16820 (M5E02_16820)	degS	3247503..3248678 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
M5E02_RS16825 (M5E02_16825)	-	3248898..3249566 (+)	669	WP_012011434.1	YigZ family protein	-
M5E02_RS16830 (M5E02_16830)	-	3249551..3250642 (+)	1092	WP_252056808.1	LCP family protein	-
M5E02_RS16835 (M5E02_16835)	-	3250678..3251745 (-)	1068	WP_048237563.1	MraY family glycosyltransferase	-
M5E02_RS16840 (M5E02_16840)	-	3251880..3253076 (-)	1197	WP_252058339.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=689225 M5E02_RS16820 WP_003213166.1 3247503..3248678(-) (degS) [Bacillus safensis strain AHB2]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=689225 M5E02_RS16820 WP_003213166.1 3247503..3248678(-) (degS) [Bacillus safensis strain AHB2]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGACAAGCTGGAAGTCCATACTAGACATGCTAGAAATCGCTTATCTGAGGTCAGCAGA
AACTTTAACAAATTTAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
ACAGCAGCGTGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACGCTTGTGAGTCAGATTACAGTGGTTCTCAACTATCTCAACCAGGATTTACGCCAGGTCGGCGTTTTACTT
GAAGATGCGCAGGCAAAACAAGATTTTGGTCTCAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGAATTTTTAGAGACCGCG
GTACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAGCATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTTATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841