Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   M5V91_RS14140 Genome accession   NZ_CP097349
Coordinates   2640201..2641160 (-) Length   319 a.a.
NCBI ID   WP_071157530.1    Uniprot ID   -
Organism   Cytobacillus pseudoceanisediminis strain BNO1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2635201..2646160
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M5V91_RS14115 (M5V91_13965) fabF 2635218..2636455 (-) 1238 Protein_2827 beta-ketoacyl-ACP synthase II -
  M5V91_RS14120 (M5V91_13970) - 2636504..2637436 (-) 933 WP_009331225.1 beta-ketoacyl-ACP synthase III -
  M5V91_RS14125 (M5V91_13975) - 2637652..2638035 (+) 384 WP_009331226.1 hypothetical protein -
  M5V91_RS14130 (M5V91_13980) - 2638046..2639047 (-) 1002 WP_232292456.1 nuclease-related domain-containing protein -
  M5V91_RS14135 (M5V91_13985) comZ 2639980..2640174 (-) 195 WP_009331228.1 ComZ family protein Regulator
  M5V91_RS14140 (M5V91_13990) med 2640201..2641160 (-) 960 WP_071157530.1 BMP family ABC transporter substrate-binding protein Regulator
  M5V91_RS14145 (M5V91_13995) - 2641278..2642111 (-) 834 WP_071157531.1 hypothetical protein -
  M5V91_RS14150 (M5V91_14000) - 2642193..2642930 (-) 738 WP_009331231.1 alpha/beta hydrolase -
  M5V91_RS14155 (M5V91_14005) - 2643145..2643336 (+) 192 WP_009331232.1 DUF2929 family protein -
  M5V91_RS14160 (M5V91_14010) clpB 2643406..2646002 (-) 2597 Protein_2836 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 319 a.a.        Molecular weight: 35492.13 Da        Isoelectric Point: 4.4450

>NTDB_id=688885 M5V91_RS14140 WP_071157530.1 2640201..2641160(-) (med) [Cytobacillus pseudoceanisediminis strain BNO1]
MHKTLVKFGILLLCLLLLASCGQSMSTGKLEKAGLLVPDTVNDQVWGTKGYKGMLKIQSHYNVEVYYKEGMNSEMVVERA
VKEFDQKGVNLIFGHGNEYAAYFNNISKKYPDIHFVSFNGDAKNDNTTSLNFEAYAMGFFGGMVAGHMTKTNNIGILAAF
EWQPEVEGFYQGVSEIDEGINVQIQYVGNWDNDNKAIALLDKMIANKTDVVYPAGDGYNVPVIEKLKEEGLYAIGYISDQ
ADLGESVVLTSTVQHVDVLYELVAKKFNEGELESGNLTFDFEDEVISLGKFSPDVDEEFKKELNAAIENYKKTGKLPNE

Nucleotide


Download         Length: 960 bp        

>NTDB_id=688885 M5V91_RS14140 WP_071157530.1 2640201..2641160(-) (med) [Cytobacillus pseudoceanisediminis strain BNO1]
ATGCATAAGACATTAGTGAAATTCGGGATCCTTCTTTTGTGCCTTCTTTTATTGGCCTCCTGCGGACAATCGATGTCTAC
AGGAAAACTTGAAAAAGCTGGATTATTAGTGCCCGATACCGTCAATGATCAGGTATGGGGGACGAAAGGCTATAAAGGCA
TGTTAAAGATTCAATCCCATTATAATGTGGAGGTTTATTATAAAGAGGGCATGAATTCTGAGATGGTTGTTGAAAGAGCT
GTTAAAGAGTTTGATCAAAAAGGTGTAAACCTGATTTTTGGACATGGCAATGAATACGCGGCATACTTTAATAACATTTC
AAAAAAATACCCTGACATTCATTTTGTCAGCTTTAATGGCGATGCCAAAAATGACAACACCACCAGCTTGAATTTTGAAG
CCTATGCAATGGGATTCTTTGGCGGCATGGTTGCTGGCCATATGACGAAAACCAATAACATAGGAATACTCGCAGCTTTT
GAATGGCAGCCGGAGGTAGAAGGTTTTTATCAAGGTGTAAGCGAAATTGATGAAGGTATAAACGTGCAAATCCAATATGT
CGGCAACTGGGACAATGATAATAAAGCCATAGCTCTCTTGGACAAAATGATTGCCAATAAGACAGATGTTGTCTATCCAG
CTGGAGATGGGTATAATGTTCCTGTCATCGAGAAACTAAAAGAGGAAGGGCTCTACGCCATCGGCTATATTTCCGACCAG
GCTGATCTGGGTGAATCAGTCGTCCTGACCAGTACGGTTCAGCATGTCGATGTTTTGTATGAACTAGTGGCAAAAAAATT
CAACGAAGGCGAATTGGAATCAGGAAATCTAACCTTTGATTTCGAGGATGAAGTTATTTCACTTGGGAAATTCAGCCCTG
ACGTCGACGAAGAATTCAAAAAAGAACTAAACGCTGCCATTGAGAATTACAAAAAAACAGGCAAACTGCCCAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(31-318)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

53.035

98.119

0.52