Detailed information NTG0688251

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: M4X66_RS00755
• Genome accession: NZ_CP097286
• Coordinates: 174507..175847 (-)
• Length: 446 a.a.
• NCBI ID: WP_057409618.1
• Uniprot ID: A0A0N8SKR9
• Organism: Pseudomonas viridiflava strain JACO-C-5
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 169507..180847

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M4X66_RS00745	-	172715..173116 (+)	402	WP_122424369.1	type IV pilin protein	-
M4X66_RS00750	thiO	173144..174256 (+)	1113	WP_249583467.1	glycine oxidase ThiO	-
M4X66_RS00755	pilR	174507..175847 (-)	1341	WP_057409618.1	sigma-54 dependent transcriptional regulator	Regulator
M4X66_RS00760	pilS	175850..177442 (-)	1593	WP_249583468.1	ATP-binding protein	Regulator
M4X66_RS00765	-	177432..177671 (-)	240	WP_283778739.1	PP0621 family protein	-
M4X66_RS00770	-	177795..178817 (-)	1023	WP_043305096.1	outer membrane protein assembly factor BamD	-
M4X66_RS00775	rluD	178967..179929 (+)	963	WP_004884074.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
M4X66_RS00780	pgeF	179926..180654 (+)	729	WP_249583469.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49861.12 Da
• Isoelectric Point: 6.4256

>NTDB_id=688251 M4X66_RS00755 WP_057409618.1 174507..175847(-) (pilR) [Pseudomonas viridiflava strain JACO-C-5]
MTPRQKILIVDDEPDIRELLEITLGRMKLDTRSACNVAEARQCLAREAFDLCLTDMRLPDGNGLELVQHIQQNFAHVPVA
MITAHGSLDTAIHALKAGAFDFLTKPVDLGRLRELVNSALRLTPVVQPIRALDNRLLGDSPPMRTLRSQIAKLARSQAPV
YISGESGSGKELVARLIHEQGPRGEKPFVPVNCGAIPSDLMESEFFGHRKGSFTGAHEDKPGLFQAAQNGTLFLDEVADL
PLAMQVKLLRAIQEKSIRSVGGQQEQVVDVRILCATHKDLSVEVAAGRFRQDLYYRLNVIELRVPSLRERREDIDQLAAI
VLQRLATNSGLPAAKLDAQALDTLKNYRFPGNVRELENMLERAYTLCENDEIHASDLRLTESARPQESDGPNLADIDNLE
DYLEGIERKLILQALEETRWNRTAAAQRLSLSFRSMRYRLKKLGLD

Nucleotide

• Length: 1341 bp

>NTDB_id=688251 M4X66_RS00755 WP_057409618.1 174507..175847(-) (pilR) [Pseudomonas viridiflava strain JACO-C-5]
ATGACCCCACGGCAAAAGATCCTGATCGTCGACGATGAGCCGGACATTCGCGAACTCCTGGAGATCACTCTGGGCCGGAT
GAAGCTCGACACCCGCAGCGCCTGCAACGTCGCCGAGGCACGTCAGTGTCTGGCTCGCGAAGCATTCGACCTGTGCCTGA
CGGACATGCGCCTGCCGGACGGCAACGGCCTGGAGCTGGTGCAGCATATCCAGCAGAACTTCGCTCACGTTCCGGTGGCG
ATGATCACGGCGCATGGCAGTCTGGATACCGCTATCCACGCGCTCAAGGCCGGTGCGTTCGACTTTCTGACCAAACCGGT
AGACCTCGGTCGCCTGCGTGAGCTGGTCAATAGCGCGCTGCGCCTCACGCCCGTCGTGCAGCCCATACGCGCTCTGGACA
ACCGCCTGCTGGGCGATTCGCCGCCCATGCGCACACTGCGCAGCCAGATCGCCAAACTGGCGCGCAGTCAGGCCCCCGTT
TACATCAGCGGCGAGTCCGGCAGCGGCAAGGAGCTGGTGGCCAGGTTGATTCACGAACAAGGGCCACGCGGAGAGAAACC
CTTCGTGCCGGTCAACTGCGGCGCCATTCCTTCCGACCTGATGGAAAGCGAATTCTTCGGGCATCGCAAAGGCAGCTTCA
CCGGTGCCCATGAAGACAAGCCGGGGCTATTCCAGGCCGCTCAGAACGGCACGCTGTTTCTGGACGAGGTGGCCGATCTG
CCGCTGGCCATGCAGGTAAAACTGCTGCGCGCGATACAGGAGAAGTCCATCCGCAGCGTTGGCGGCCAGCAGGAACAGGT
GGTGGACGTACGGATTCTCTGTGCGACCCACAAGGACCTGAGCGTGGAGGTGGCCGCAGGACGCTTCCGGCAGGATCTGT
ATTACCGATTGAACGTCATCGAGTTGCGCGTACCGTCGCTGCGCGAGCGTCGTGAAGACATCGACCAACTGGCCGCCATC
GTCCTGCAGCGTCTGGCGACCAACAGCGGACTGCCCGCCGCGAAACTCGACGCCCAGGCACTGGATACGCTGAAAAACTA
TCGTTTTCCCGGCAACGTTCGTGAGCTGGAGAACATGCTGGAGCGTGCCTACACGCTGTGCGAAAACGACGAAATCCACG
CATCCGACCTGCGCCTGACCGAGTCTGCAAGACCACAGGAAAGCGACGGCCCGAACCTGGCCGACATCGACAATCTGGAA
GATTATCTGGAAGGCATCGAGCGCAAACTGATTCTGCAGGCCCTGGAAGAAACCCGCTGGAACCGCACAGCGGCAGCCCA
GCGGCTGAGCCTGTCATTCAGGTCGATGCGTTATCGGTTGAAGAAGCTGGGGCTGGATTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-116)

• Bacterial regulatory protein, Fis family (HTH_8) (403-443)

• Sigma-54 interaction domain (Sigma54_activat) (137-302)

3D structure

• AlphaFold DB: A0A0N8SKR9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	79.458	99.327	0.789
pilR	Acinetobacter baumannii strain A118	49.676	100	0.516