Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   M2M89_RS19010 Genome accession   NZ_CP097130
Coordinates   3708921..3709040 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain S16     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3703921..3714040
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M2M89_RS18990 albG 3704085..3704786 (+) 702 WP_041850410.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  M2M89_RS18995 ywhL 3704792..3706168 (-) 1377 WP_128441926.1 YncE family protein -
  M2M89_RS19000 ywhK 3706207..3707562 (-) 1356 WP_015250986.1 YncE family protein -
  M2M89_RS20895 - 3707559..3707789 (-) 231 WP_069703618.1 hypothetical protein -
  M2M89_RS19005 rapF 3707792..3708937 (+) 1146 WP_029318693.1 response regulator aspartate phosphatase RapF Regulator
  M2M89_RS19010 phrF 3708921..3709040 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  M2M89_RS19015 - 3709110..3709274 (-) 165 WP_248719425.1 hypothetical protein -
  M2M89_RS19020 - 3709195..3709604 (+) 410 Protein_3699 YbaK/EbsC family protein -
  M2M89_RS19025 speB 3709635..3710507 (-) 873 WP_003227545.1 agmatinase -
  M2M89_RS19030 speE 3710568..3711398 (-) 831 WP_003227543.1 spermidine synthase -
  M2M89_RS19035 pbpG 3711601..3713676 (+) 2076 WP_038427996.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=687466 M2M89_RS19010 WP_009968329.1 3708921..3709040(+) (phrF) [Bacillus subtilis strain S16]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=687466 M2M89_RS19010 WP_009968329.1 3708921..3709040(+) (phrF) [Bacillus subtilis strain S16]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487