Detailed information NTG0687465

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: M2M89_RS19005
• Genome accession: NZ_CP097130
• Coordinates: 3707792..3708937 (+)
• Length: 381 a.a.
• NCBI ID: WP_029318693.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain S16
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3702792..3713937

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M2M89_RS18985	albF	3702808..3704088 (+)	1281	WP_041850411.1	pitrilysin family protein	-
M2M89_RS18990	albG	3704085..3704786 (+)	702	WP_041850410.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
M2M89_RS18995	ywhL	3704792..3706168 (-)	1377	WP_128441926.1	YncE family protein	-
M2M89_RS19000	ywhK	3706207..3707562 (-)	1356	WP_015250986.1	YncE family protein	-
M2M89_RS20895	-	3707559..3707789 (-)	231	WP_069703618.1	hypothetical protein	-
M2M89_RS19005	rapF	3707792..3708937 (+)	1146	WP_029318693.1	response regulator aspartate phosphatase RapF	Regulator
M2M89_RS19010	phrF	3708921..3709040 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
M2M89_RS19015	-	3709110..3709274 (-)	165	WP_248719425.1	hypothetical protein	-
M2M89_RS19020	-	3709195..3709604 (+)	410	Protein_3699	YbaK/EbsC family protein	-
M2M89_RS19025	speB	3709635..3710507 (-)	873	WP_003227545.1	agmatinase	-
M2M89_RS19030	speE	3710568..3711398 (-)	831	WP_003227543.1	spermidine synthase	-
M2M89_RS19035	pbpG	3711601..3713676 (+)	2076	WP_038427996.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45594.05 Da
• Isoelectric Point: 5.0624

>NTDB_id=687465 M2M89_RS19005 WP_029318693.1 3707792..3708937(+) (rapF) [Bacillus subtilis strain S16]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=687465 M2M89_RS19005 WP_029318693.1 3707792..3708937(+) (rapF) [Bacillus subtilis strain S16]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572