Detailed information NTG0684847

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: EFK13_RS02320
• Genome accession: NZ_CP096889
• Coordinates: 455996..457144 (+)
• Length: 382 a.a.
• NCBI ID: WP_064814577.1
• Uniprot ID: -
• Organism: Bacillus cabrialesii strain TE3
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 450996..462144

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EFK13_RS02300 (EFK13_02300)	-	451367..452047 (-)	681	WP_075750126.1	ABC transporter ATP-binding protein	-
EFK13_RS02305 (EFK13_02305)	-	452063..453535 (-)	1473	WP_129506708.1	ABC transporter permease	-
EFK13_RS02310 (EFK13_02310)	yclJ	453748..454431 (+)	684	WP_129506707.1	two-component system response regulator YclJ	-
EFK13_RS02315 (EFK13_02315)	-	454418..455833 (+)	1416	WP_129506706.1	HAMP domain-containing sensor histidine kinase	-
EFK13_RS02320 (EFK13_02320)	rapC	455996..457144 (+)	1149	WP_064814577.1	response regulator aspartate phosphatase RapC	Regulator
EFK13_RS02325 (EFK13_02325)	phrC	457128..457250 (+)	123	WP_129506705.1	phosphatase RapC inhibitor PhrC	Regulator
EFK13_RS02330 (EFK13_02330)	-	457349..457438 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
EFK13_RS02335 (EFK13_02335)	-	457593..457703 (-)	111	WP_129506704.1	YjcZ family sporulation protein	-
EFK13_RS02340 (EFK13_02340)	-	457857..459221 (-)	1365	WP_129506703.1	aspartate kinase	-
EFK13_RS02345 (EFK13_02345)	ceuB	459607..460557 (+)	951	WP_129506702.1	petrobactin ABC transporter permease YclN	Machinery gene
EFK13_RS02350 (EFK13_02350)	yclO	460550..461497 (+)	948	WP_129506701.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45653.72 Da
• Isoelectric Point: 4.9767

>NTDB_id=684847 EFK13_RS02320 WP_064814577.1 455996..457144(+) (rapC) [Bacillus cabrialesii strain TE3]
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALDMAEGEQKAQLVGRAYYNLGLCYYNQDLLD
LAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKRGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=684847 EFK13_RS02320 WP_064814577.1 455996..457144(+) (rapC) [Bacillus cabrialesii strain TE3]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGCACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCACGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGCCACCAGCTTATGCTTGATTATCTAGAGCCGTTAGAGAAGTTAAATATCGAGGACCAGCCG
AGCCTGTCTGAATTATCTAGAAACATCGACAGCAATCAGGCGGATCTCAAAGGGCTGCTCGACTATTATGTGAATTTTTT
CCGCGGAATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATATTATAAACAAGCGGAGAAAAAGCTTTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTCTATTTTAAGATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTATGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
TGTGTTCGGGGTCAATCTAATGGATGAAAGGAATTTCGAACAAGCCGCCCGCCATTTTAAATTGGCGCTCGATATGGCCG
AAGGGGAACAAAAAGCCCAGCTGGTCGGAAGAGCGTATTACAATCTGGGGTTATGCTATTACAATCAAGACCTTCTTGAC
CTTGCCATTGATTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGGATCGTCAATTCACTTCCGCAAGCATACTT
CTTAATTACCTTGATTTATTATAAAAGGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTACGCGGTAAAATTCGAGTTTTTGCAATCCCTATATCAGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAATACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAAAAATGGTTCAAACTGTCTGCTTCCTACTTTCTAAAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	97.906	100	0.979
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571