Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   M2A29_RS14820 Genome accession   NZ_CP096812
Coordinates   3158492..3158902 (-) Length   136 a.a.
NCBI ID   WP_272326643.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 51248     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3153492..3163902
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M2A29_RS14790 (M2A29_14785) - 3153578..3153847 (-) 270 WP_000567533.1 HPr family phosphocarrier protein -
  M2A29_RS14795 (M2A29_14790) rapZ 3153844..3154695 (-) 852 WP_000821671.1 RNase adapter RapZ -
  M2A29_RS14800 (M2A29_14795) panC 3154718..3155566 (-) 849 WP_000846362.1 pantoate--beta-alanine ligase -
  M2A29_RS14805 (M2A29_14800) panB 3155570..3156379 (-) 810 WP_000624763.1 3-methyl-2-oxobutanoate hydroxymethyltransferase -
  M2A29_RS14810 (M2A29_14805) folK 3156425..3156907 (-) 483 WP_000219215.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  M2A29_RS14815 (M2A29_14810) pcnB 3156904..3158367 (-) 1464 WP_001194201.1 polynucleotide adenylyltransferase PcnB -
  M2A29_RS14820 (M2A29_14815) comEA 3158492..3158902 (-) 411 WP_272326643.1 ComEA family DNA-binding protein Machinery gene
  M2A29_RS14825 (M2A29_14820) mazG 3158871..3159677 (-) 807 WP_000359495.1 nucleoside triphosphate pyrophosphohydrolase -
  M2A29_RS14830 (M2A29_14825) - 3159789..3160562 (+) 774 WP_000682841.1 SDR family oxidoreductase -
  M2A29_RS14835 (M2A29_14830) - 3160607..3162913 (-) 2307 WP_000259109.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15658.94 Da        Isoelectric Point: 10.4475

>NTDB_id=684321 M2A29_RS14820 WP_272326643.1 3158492..3158902(-) (comEA) [Acinetobacter baumannii strain 51248]
MQYSMRFWKNKYFLLIMLCLGVISPSAYAQSFDKNFQEWKAKQQMYDQKLNISKSSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGIGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL

Nucleotide


Download         Length: 411 bp        

>NTDB_id=684321 M2A29_RS14820 WP_272326643.1 3158492..3158902(-) (comEA) [Acinetobacter baumannii strain 51248]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTCTTTTAATAATGTTGTGCTTGGGGGTAATTTCACCTTCGGC
TTACGCTCAATCTTTTGACAAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCTCTA
AGTCTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCTATTTTTGAAAAAAATAAATCGCGTT
TAGCCTTATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(74-134)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Acinetobacter baumannii strain A118

96.324

100

0.963
  comEA Acinetobacter baumannii D1279779

95.588

100

0.956
  comEA Acinetobacter baylyi ADP1

41.985

96.324

0.404