Detailed information NTG0683564

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OLL86_RS00175
• Genome accession: NZ_CP110225
• Coordinates: 37161..38408 (-)
• Length: 415 a.a.
• NCBI ID: WP_264780065.1
• Uniprot ID: -
• Organism: Gallibacterium anatis strain IMT49310
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 32161..43408

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OLL86_RS00155 (OLL86_00155)	fruK	32869..33807 (-)	939	WP_264780062.1	1-phosphofructokinase	-
OLL86_RS00160 (OLL86_00160)	fruB	33809..34969 (-)	1161	WP_264780063.1	fused PTS fructose transporter subunit IIA/HPr protein	-
OLL86_RS00165 (OLL86_00165)	-	35189..36490 (-)	1302	WP_264780064.1	anaerobic C4-dicarboxylate transporter	-
OLL86_RS00170 (OLL86_00170)	-	36621..37019 (-)	399	WP_013745611.1	YbaN family protein	-
OLL86_RS00175 (OLL86_00175)	clpX	37161..38408 (-)	1248	WP_264780065.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
OLL86_RS00180 (OLL86_00180)	clpP	38420..39007 (-)	588	WP_013745609.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
OLL86_RS00185 (OLL86_00185)	tig	39148..40449 (-)	1302	WP_018345830.1	trigger factor	-
OLL86_RS00190 (OLL86_00190)	-	40787..41602 (+)	816	WP_039087707.1	NAD-dependent dehydratase	-

Sequence

Protein

• Length: 415 a.a.
• Molecular weight: 46220.81 Da
• Isoelectric Point: 4.9442

>NTDB_id=683564 OLL86_RS00175 WP_264780065.1 37161..38408(-) (clpX) [Gallibacterium anatis strain IMT49310]
MSDKPENNEKFYCSLCGKEKHEVGKLIAGVSGYICNECVETCHDLLMEEANKHQKEQEQEKPFEKLPTPHQIRAHLDDYV
IGQDQAKKILSVAVYNHYKRLRNNETDLDVELGKSNILLIGPTGSGKTLLAQTLARQINVPFAIADATTLTEAGYVGEDV
ENIIQRLLQNCDYDTEKAEQGIIYIDEIDKITRKSENPSITRDVSGEGVQQALLKLIEGTIASVPPQGGRKHPQQEFLKV
DTSKILFICGGAFSGLDKIIEKRTHKDRGIGFNANVQSKEKEHDIGELFAQVETEDLIKFGLIPEFVGRLPVVASLAELD
EEALIRILTVPKNALIKQYQALFTLENVELEFTPEALTAIAKKALARKTGARGLRSIVESVLLDTMYDLPSLEGLKKVVV
DQDVIDNQALPKLEY

Nucleotide

• Length: 1248 bp

>NTDB_id=683564 OLL86_RS00175 WP_264780065.1 37161..38408(-) (clpX) [Gallibacterium anatis strain IMT49310]
ATGTCAGATAAACCAGAAAACAACGAAAAATTTTACTGCTCACTTTGTGGCAAAGAAAAACACGAAGTCGGCAAATTAAT
CGCCGGTGTATCCGGTTATATTTGCAATGAATGTGTGGAAACTTGCCACGATTTATTAATGGAAGAAGCCAATAAACATC
AAAAAGAGCAAGAACAGGAAAAACCGTTTGAAAAATTGCCTACTCCTCACCAAATTCGCGCACATTTGGATGATTATGTC
ATTGGACAAGATCAGGCGAAAAAAATCCTTTCCGTTGCTGTTTATAACCATTACAAACGTTTACGCAACAATGAAACCGA
TCTTGATGTTGAATTAGGCAAAAGTAACATTTTGCTTATCGGTCCGACCGGAAGCGGGAAAACATTATTGGCGCAAACAT
TAGCTCGCCAAATTAATGTGCCTTTCGCCATTGCCGATGCTACTACATTGACTGAAGCCGGTTATGTCGGTGAGGATGTG
GAAAATATTATCCAGCGGTTATTGCAAAATTGCGATTACGATACGGAAAAAGCGGAACAGGGTATTATTTATATTGATGA
AATCGATAAAATTACTCGTAAATCTGAAAACCCTTCCATTACCCGCGATGTTTCCGGTGAAGGTGTGCAACAAGCGTTAT
TAAAACTGATTGAAGGCACTATTGCCTCCGTTCCGCCTCAAGGCGGACGCAAACACCCACAGCAAGAGTTTTTGAAAGTA
GATACCTCAAAAATTCTGTTTATTTGTGGCGGTGCATTCTCCGGTTTGGATAAAATCATTGAAAAACGTACCCACAAAGA
TCGTGGAATCGGTTTTAATGCCAATGTACAAAGCAAAGAGAAAGAGCACGATATCGGTGAATTGTTCGCGCAAGTCGAAA
CTGAAGATTTAATTAAATTCGGTTTAATTCCTGAATTTGTCGGTCGTTTGCCGGTTGTAGCCTCATTAGCTGAATTGGAT
GAAGAAGCATTAATTCGCATTTTAACCGTGCCAAAAAATGCCTTAATCAAACAATATCAAGCGCTATTTACACTGGAAAA
TGTGGAGTTGGAATTCACTCCGGAAGCATTAACCGCCATTGCTAAAAAAGCACTGGCACGTAAAACCGGTGCTAGAGGAT
TACGTTCCATTGTCGAAAGCGTGCTGCTCGATACAATGTACGATCTTCCTTCTTTAGAAGGATTAAAGAAAGTCGTTGTA
GATCAGGATGTTATTGATAATCAAGCCCTACCGAAATTAGAATACTAA

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-47)

• AAA domain (Cdc48 subfamily) (AAA_2) (114-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (319-393)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	56.971	100	0.571
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.025	95.904	0.528