Detailed information NTG0683356

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: M1S49_RS07875
• Genome accession: NZ_CP096731
• Coordinates: 1656722..1657423 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 5689
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1651722..1662423

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M1S49_RS07840 (M1S49_07840)	kdsB	1652245..1653006 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
M1S49_RS07845 (M1S49_07845)	-	1653018..1653998 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
M1S49_RS07850 (M1S49_07850)	-	1654010..1654351 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
M1S49_RS07855 (M1S49_07855)	-	1654369..1655142 (+)	774	WP_000497298.1	TatD family hydrolase	-
M1S49_RS07860 (M1S49_07860)	-	1655180..1655788 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
M1S49_RS07865 (M1S49_07865)	-	1655798..1656352 (+)	555	WP_000841373.1	type II secretion system protein	-
M1S49_RS07870 (M1S49_07870)	xcpV	1656342..1656722 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
M1S49_RS07875 (M1S49_07875)	xcpW	1656722..1657423 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
M1S49_RS07880 (M1S49_07880)	gspK	1657423..1658382 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
M1S49_RS07885 (M1S49_07885)	-	1658613..1659209 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
M1S49_RS07890 (M1S49_07890)	ung	1659260..1659973 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
M1S49_RS07895 (M1S49_07895)	-	1659970..1661094 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
M1S49_RS07900 (M1S49_07900)	tadA	1661101..1661604 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
M1S49_RS07905 (M1S49_07905)	-	1661674..1662117 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=683356 M1S49_RS07875 WP_000594589.1 1656722..1657423(+) (xcpW) [Acinetobacter baumannii strain 5689]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=683356 M1S49_RS07875 WP_000594589.1 1656722..1657423(+) (xcpW) [Acinetobacter baumannii strain 5689]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996