Detailed information NTG0068282

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPATCC43504_RS07020
• Genome accession: NZ_AP017632
• Coordinates: 1468395..1469195 (-)
• Length: 266 a.a.
• NCBI ID: WP_108169258.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain ATCC 43504
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1463395..1474195

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPATCC43504_RS06990 (HPATCC43504_01401)	recJ	1463539..1465089 (+)	1551	WP_108169252.1	single-stranded-DNA-specific exonuclease RecJ	-
HPATCC43504_RS06995 (HPPMSS1_RS07315)	-	1465242..1465969 (+)	728	Protein_1387	RluA family pseudouridine synthase	-
HPATCC43504_RS07000 (HPATCC43504_01404)	-	1466072..1466632 (-)	561	WP_108169254.1	hypothetical protein	-
HPATCC43504_RS07005 (HPATCC43504_01405)	-	1466616..1466954 (-)	339	WP_108169255.1	hypothetical protein	-
HPATCC43504_RS07010 (HPATCC43504_01406)	-	1467082..1467864 (-)	783	WP_108169256.1	tetratricopeptide repeat protein	-
HPATCC43504_RS07015 (HPATCC43504_01408)	dprB	1467994..1468398 (-)	405	WP_108169257.1	Holliday junction resolvase RuvX	Machinery gene
HPATCC43504_RS07020 (HPATCC43504_01409)	dprA	1468395..1469195 (-)	801	WP_108169258.1	DNA-processing protein DprA	Machinery gene
HPATCC43504_RS07025 (HPATCC43504_01410)	minE	1469207..1469440 (-)	234	WP_000051425.1	cell division topological specificity factor MinE	-
HPATCC43504_RS07030 (HPATCC43504_01411)	minD	1469437..1470243 (-)	807	WP_108169259.1	septum site-determining protein MinD	-
HPATCC43504_RS07035 (HPATCC43504_01412)	ilvC	1470267..1471259 (-)	993	WP_108169260.1	ketol-acid reductoisomerase	-
HPATCC43504_RS07045 (HPATCC43504_01413)	-	1471508..1472290 (+)	783	WP_108169261.1	NAD+ synthase	-
HPATCC43504_RS07050 (HPATCC43504_01414)	-	1472287..1473225 (+)	939	WP_108169262.1	tetraacyldisaccharide 4'-kinase	-
HPATCC43504_RS07055 (HPATCC43504_01415)	pseH	1473158..1473700 (-)	543	WP_108169263.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29787.67 Da
• Isoelectric Point: 8.5826

>NTDB_id=68282 HPATCC43504_RS07020 WP_108169258.1 1468395..1469195(-) (dprA) [Helicobacter pylori strain ATCC 43504]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTITLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=68282 HPATCC43504_RS07020 WP_108169258.1 1468395..1469195(-) (dprA) [Helicobacter pylori strain ATCC 43504]
ATGAAAAGCCATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCTCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTGGGCGTG
GATATTATCGCTCAAGAAAACGCCTTGCCAAAAACGATCACGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACAAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCTTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCTCAAAAATACCAAAAACCCTTGTTTGTTTTGCCTCAGCGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACTCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCCAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414