Detailed information
Bioinformatically predicted
Overview
| Name | crp | Type | Regulator |
| Locus tag | M1S44_RS06520 | Genome accession | NZ_CP096682 |
| Coordinates | 1368037..1368702 (-) | Length | 221 a.a. |
| NCBI ID | WP_000203219.1 | Uniprot ID | A0A219CAS9 |
| Organism | Acinetobacter baumannii strain 5955 | ||
| Function | regulate competence development (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1331557..1370883 | 1368037..1368702 | within | 0 |
| IScluster/Tn | 1366890..1367980 | 1368037..1368702 | flank | 57 |
Gene organization within MGE regions
Location: 1331557..1370883
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M1S44_RS06320 (M1S44_06320) | - | 1331557..1331919 (+) | 363 | WP_000721834.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| M1S44_RS06325 (M1S44_06325) | - | 1332083..1332553 (+) | 471 | WP_001102889.1 | AnBLUF65 family BLUF photoreceptors | - |
| M1S44_RS06330 (M1S44_06330) | - | 1332550..1332876 (-) | 327 | WP_000469223.1 | hypothetical protein | - |
| M1S44_RS06335 (M1S44_06335) | - | 1333444..1333515 (-) | 72 | Protein_1214 | LysE family translocator | - |
| M1S44_RS06340 (M1S44_06340) | - | 1333579..1334283 (+) | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| M1S44_RS06345 (M1S44_06345) | - | 1334313..1334852 (+) | 540 | WP_029642339.1 | recombinase family protein | - |
| M1S44_RS06350 (M1S44_06350) | blaTEM | 1335035..1335895 (+) | 861 | Protein_1217 | TEM family class A beta-lactamase | - |
| M1S44_RS06355 (M1S44_06355) | - | 1335966..1336670 (-) | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| M1S44_RS19810 | - | 1336695..1336955 (+) | 261 | WP_283251257.1 | DUF4158 domain-containing protein | - |
| M1S44_RS06360 (M1S44_06360) | - | 1336960..1337685 (+) | 726 | WP_283251256.1 | DUF4158 domain-containing protein | - |
| M1S44_RS19815 | - | 1338387..1338488 (+) | 102 | WP_283251258.1 | hypothetical protein | - |
| M1S44_RS06365 (M1S44_06365) | - | 1338644..1339368 (+) | 725 | Protein_1222 | Tn3 family transposase | - |
| M1S44_RS06370 (M1S44_06370) | - | 1339286..1339466 (+) | 181 | Protein_1223 | hypothetical protein | - |
| M1S44_RS06375 (M1S44_06375) | - | 1339689..1340348 (+) | 660 | WP_000904905.1 | recombinase family protein | - |
| M1S44_RS06380 (M1S44_06380) | - | 1340360..1341061 (+) | 702 | Protein_1225 | IS6 family transposase | - |
| M1S44_RS06385 (M1S44_06385) | - | 1341091..1341630 (+) | 540 | WP_029642339.1 | recombinase family protein | - |
| M1S44_RS19820 | blaTEM | 1341813..1342669 (+) | 857 | Protein_1227 | TEM family class A beta-lactamase | - |
| M1S44_RS06400 (M1S44_06400) | - | 1342739..1343443 (-) | 705 | Protein_1228 | IS6 family transposase | - |
| M1S44_RS06405 (M1S44_06405) | - | 1343504..1346344 (+) | 2841 | Protein_1229 | Tn3 family transposase | - |
| M1S44_RS06410 (M1S44_06410) | - | 1346454..1347113 (+) | 660 | WP_249379517.1 | recombinase family protein | - |
| M1S44_RS06415 (M1S44_06415) | - | 1347125..1347825 (+) | 701 | Protein_1231 | IS6-like element IS26 family transposase | - |
| M1S44_RS06420 (M1S44_06420) | - | 1347856..1348394 (+) | 539 | Protein_1232 | recombinase family protein | - |
| M1S44_RS06425 (M1S44_06425) | - | 1348574..1349434 (+) | 861 | WP_000027057.1 | broad-spectrum class A beta-lactamase TEM-1 | - |
| M1S44_RS06430 (M1S44_06430) | - | 1349505..1350209 (-) | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| M1S44_RS19825 | - | 1350270..1353124 (+) | 2855 | Protein_1235 | Tn3 family transposase | - |
| M1S44_RS06450 (M1S44_06450) | - | 1353235..1353896 (+) | 662 | Protein_1236 | recombinase family protein | - |
| M1S44_RS06455 (M1S44_06455) | - | 1353908..1354610 (+) | 703 | Protein_1237 | IS6-like element IS26 family transposase | - |
| M1S44_RS06460 (M1S44_06460) | - | 1354663..1354893 (+) | 231 | Protein_1238 | hypothetical protein | - |
| M1S44_RS06465 (M1S44_06465) | rnhB | 1354959..1355525 (+) | 567 | WP_000495836.1 | ribonuclease HII | - |
| M1S44_RS06470 (M1S44_06470) | csrA | 1355595..1355849 (-) | 255 | WP_000906487.1 | carbon storage regulator CsrA | - |
| M1S44_RS06475 (M1S44_06475) | - | 1356096..1357376 (-) | 1281 | WP_001185176.1 | aspartate kinase | - |
| M1S44_RS06480 (M1S44_06480) | alaS | 1357442..1360079 (-) | 2638 | Protein_1242 | alanine--tRNA ligase | - |
| M1S44_RS06485 (M1S44_06485) | gap | 1360349..1361374 (+) | 1026 | WP_001188823.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| M1S44_RS06490 (M1S44_06490) | - | 1361650..1362816 (+) | 1167 | WP_000155680.1 | ATP phosphoribosyltransferase regulatory subunit | - |
| M1S44_RS06495 (M1S44_06495) | - | 1362881..1364200 (+) | 1320 | WP_000517792.1 | adenylosuccinate synthase | - |
| M1S44_RS06500 (M1S44_06500) | - | 1364323..1364640 (+) | 318 | WP_000776215.1 | hypothetical protein | - |
| M1S44_RS06505 (M1S44_06505) | - | 1364757..1365536 (+) | 780 | WP_001034598.1 | M48 family metallopeptidase | - |
| M1S44_RS06510 (M1S44_06510) | - | 1365596..1366645 (-) | 1050 | WP_001159802.1 | NADP(H)-dependent aldo-keto reductase | - |
| M1S44_RS06520 (M1S44_06520) | crp | 1368037..1368702 (-) | 666 | WP_000203219.1 | cAMP-activated global transcriptional regulator CRP | Regulator |
| M1S44_RS06525 (M1S44_06525) | - | 1368943..1369062 (+) | 120 | Protein_1251 | hypothetical protein | - |
| M1S44_RS06530 (M1S44_06530) | - | 1369141..1369563 (+) | 423 | WP_001195082.1 | OsmC family protein | - |
| M1S44_RS06535 (M1S44_06535) | - | 1369655..1370080 (+) | 426 | WP_001026230.1 | GNAT family N-acetyltransferase | - |
| M1S44_RS06540 (M1S44_06540) | - | 1370077..1370883 (-) | 807 | WP_249379520.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
Sequence
Protein
Download Length: 221 a.a. Molecular weight: 24956.78 Da Isoelectric Point: 8.1128
>NTDB_id=682313 M1S44_RS06520 WP_000203219.1 1368037..1368702(-) (crp) [Acinetobacter baumannii strain 5955]
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKMTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFLCTR
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKMTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFLCTR
Nucleotide
Download Length: 666 bp
>NTDB_id=682313 M1S44_RS06520 WP_000203219.1 1368037..1368702(-) (crp) [Acinetobacter baumannii strain 5955]
ATGACTTCAAATTTTTCACAACTCAGCACAGATGCTTTATCTCCGGGGCAACTACCTGAATCCGTTAAAGCATTGTTAAA
ACGTGCTCACATCAACAGATATCCAAAACGAACCACAATTGTTGATGCCGGAACAGAGTCAAAATCTTTATATTTAATTT
TAAAAGGCTCAGTTTCAATTATTTTACGTGAAGACGATGAACGTGAAATTGTTGTGGCATATTTGAATCCTGGTGACTTC
TTTGGGGAAATGGGGCTTTTCGAACCGAACCCTCAACGTACAGCTGAAGTTCGTACCCGTGATGTCTGTGAAATTGCGGA
AATTTCATATGACAACTTCCACGAACTGAGCAAACAGTATCCAGATCTCAGCTATGCCGTTTTCGCGCAACTCGTTCGTC
GTTTAAAAAATACAACTCGTAAAATGACCGATCTTGCATTTATTGATGTGTCAGGCCGTATTGCGCGTTGCTTAATCGAC
CTATCTTCACAACCAGAAGCAATGATCTTGCCGAATGGCCGTCAAATTCGTATTACTCGACAAGAGATTGGACGCATTGT
CGGGTGTTCACGAGAAATGGTTGGCCGTGTATTAAAGACCTTAGAAGATCAAGGTATGATTCAAACTGACGGTAAAGCTA
TTCTAATTTTTCTCTGTACACGATAA
ATGACTTCAAATTTTTCACAACTCAGCACAGATGCTTTATCTCCGGGGCAACTACCTGAATCCGTTAAAGCATTGTTAAA
ACGTGCTCACATCAACAGATATCCAAAACGAACCACAATTGTTGATGCCGGAACAGAGTCAAAATCTTTATATTTAATTT
TAAAAGGCTCAGTTTCAATTATTTTACGTGAAGACGATGAACGTGAAATTGTTGTGGCATATTTGAATCCTGGTGACTTC
TTTGGGGAAATGGGGCTTTTCGAACCGAACCCTCAACGTACAGCTGAAGTTCGTACCCGTGATGTCTGTGAAATTGCGGA
AATTTCATATGACAACTTCCACGAACTGAGCAAACAGTATCCAGATCTCAGCTATGCCGTTTTCGCGCAACTCGTTCGTC
GTTTAAAAAATACAACTCGTAAAATGACCGATCTTGCATTTATTGATGTGTCAGGCCGTATTGCGCGTTGCTTAATCGAC
CTATCTTCACAACCAGAAGCAATGATCTTGCCGAATGGCCGTCAAATTCGTATTACTCGACAAGAGATTGGACGCATTGT
CGGGTGTTCACGAGAAATGGTTGGCCGTGTATTAAAGACCTTAGAAGATCAAGGTATGATTCAAACTGACGGTAAAGCTA
TTCTAATTTTTCTCTGTACACGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| crp | Acinetobacter baumannii D1279779 |
100 |
98.19 |
0.982 |
| crp | Vibrio cholerae strain A1552 |
47.317 |
92.76 |
0.439 |
| crp | Haemophilus influenzae Rd KW20 |
48.705 |
87.33 |
0.425 |