Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | ABRG53_RS06155 | Genome accession | NZ_AP017560 |
| Coordinates | 1341950..1342321 (-) | Length | 123 a.a. |
| NCBI ID | WP_126385812.1 | Uniprot ID | A0A2Z5WVS3 |
| Organism | Pseudanabaena sp. ABRG5-3 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1336950..1347321
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABRG53_RS06135 (ABRG53_1213) | - | 1337451..1338560 (-) | 1110 | WP_126385808.1 | fatty acid desaturase family protein | - |
| ABRG53_RS06140 (ABRG53_1214) | - | 1338718..1340274 (-) | 1557 | WP_126385809.1 | mercuric reductase | - |
| ABRG53_RS06145 (ABRG53_1215) | - | 1340409..1341293 (-) | 885 | WP_126385810.1 | DUF72 domain-containing protein | - |
| ABRG53_RS06150 (ABRG53_1216) | - | 1341380..1341886 (+) | 507 | WP_126385811.1 | phosphate-starvation-inducible PsiE family protein | - |
| ABRG53_RS06155 (ABRG53_1217) | pilH | 1341950..1342321 (-) | 372 | WP_126385812.1 | response regulator | Machinery gene |
| ABRG53_RS06160 (ABRG53_1218) | - | 1342596..1343582 (+) | 987 | WP_126385813.1 | ATP-binding cassette domain-containing protein | - |
| ABRG53_RS06165 (ABRG53_1219) | - | 1343904..1344134 (+) | 231 | WP_126385814.1 | hypothetical protein | - |
| ABRG53_RS06170 (ABRG53_1220) | - | 1344131..1345510 (-) | 1380 | WP_126385815.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 123 a.a. Molecular weight: 13883.20 Da Isoelectric Point: 6.2250
>NTDB_id=67995 ABRG53_RS06155 WP_126385812.1 1341950..1342321(-) (pilH) [Pseudanabaena sp. ABRG5-3]
MVKVLVVDDSPMVLEMVSAHLKQHGMEVTEANNGAEAVERLKAFTPDLVVTDVVMPQMNGYELCRWIKNNASTKDVPVIM
CTTKSEEFDKYWGMKQGADAYLTKPYHPPELIKTIKQLLSQVK
MVKVLVVDDSPMVLEMVSAHLKQHGMEVTEANNGAEAVERLKAFTPDLVVTDVVMPQMNGYELCRWIKNNASTKDVPVIM
CTTKSEEFDKYWGMKQGADAYLTKPYHPPELIKTIKQLLSQVK
Nucleotide
Download Length: 372 bp
>NTDB_id=67995 ABRG53_RS06155 WP_126385812.1 1341950..1342321(-) (pilH) [Pseudanabaena sp. ABRG5-3]
ATGGTAAAAGTCCTCGTAGTGGACGACAGTCCGATGGTGTTGGAGATGGTCTCGGCACATTTAAAACAACATGGTATGGA
AGTTACGGAAGCTAATAACGGTGCTGAGGCAGTAGAAAGGCTTAAAGCTTTTACTCCCGATCTCGTTGTTACCGATGTGG
TCATGCCTCAAATGAATGGTTATGAGTTATGCCGTTGGATCAAAAATAATGCCTCTACGAAGGATGTACCCGTAATTATG
TGTACAACCAAAAGTGAGGAATTTGATAAGTACTGGGGCATGAAACAGGGGGCAGATGCTTACTTAACTAAGCCTTATCA
TCCACCTGAATTAATCAAAACCATTAAGCAGTTACTTAGTCAGGTCAAATAA
ATGGTAAAAGTCCTCGTAGTGGACGACAGTCCGATGGTGTTGGAGATGGTCTCGGCACATTTAAAACAACATGGTATGGA
AGTTACGGAAGCTAATAACGGTGCTGAGGCAGTAGAAAGGCTTAAAGCTTTTACTCCCGATCTCGTTGTTACCGATGTGG
TCATGCCTCAAATGAATGGTTATGAGTTATGCCGTTGGATCAAAAATAATGCCTCTACGAAGGATGTACCCGTAATTATG
TGTACAACCAAAAGTGAGGAATTTGATAAGTACTGGGGCATGAAACAGGGGGCAGATGCTTACTTAACTAAGCCTTATCA
TCCACCTGAATTAATCAAAACCATTAAGCAGTTACTTAGTCAGGTCAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
61.345 |
96.748 |
0.594 |
| micA | Streptococcus pneumoniae Cp1015 |
37.19 |
98.374 |
0.366 |
| pilG | Acinetobacter baumannii strain A118 |
37.815 |
96.748 |
0.366 |