Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OBG92_RS01995 Genome accession   NZ_CP109657
Coordinates   416887..417294 (+) Length   135 a.a.
NCBI ID   WP_003148848.1    Uniprot ID   A0A2R3J4N2
Organism   Pseudomonas aeruginosa strain Zw26     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 411887..422294
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OBG92_RS01965 (OBG92_00381) - 411947..412951 (-) 1005 WP_003157750.1 aspartate carbamoyltransferase catalytic subunit -
  OBG92_RS01970 (OBG92_00382) pyrR 412975..413487 (-) 513 WP_003157749.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  OBG92_RS01975 (OBG92_00383) ruvX 413588..414022 (-) 435 WP_053816547.1 Holliday junction resolvase RuvX -
  OBG92_RS01980 (OBG92_00384) - 414022..414591 (-) 570 WP_053816548.1 YqgE/AlgH family protein -
  OBG92_RS01985 (OBG92_00385) - 414640..415533 (-) 894 WP_003157746.1 energy transducer TonB -
  OBG92_RS01990 (OBG92_00386) gshB 415679..416632 (-) 954 WP_012073999.1 glutathione synthase -
  OBG92_RS01995 (OBG92_00387) pilG 416887..417294 (+) 408 WP_003148848.1 twitching motility response regulator PilG Regulator
  OBG92_RS02000 (OBG92_00388) pilH 417341..417706 (+) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  OBG92_RS02005 (OBG92_00389) - 417756..418292 (+) 537 WP_003148849.1 chemotaxis protein CheW -
  OBG92_RS02010 (OBG92_00390) pilJ 418378..420426 (+) 2049 WP_012074000.1 chemotaxis chemoreceptor PilJ -
  OBG92_RS02015 (OBG92_00391) pilK 420487..421362 (+) 876 WP_003148852.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14704.09 Da        Isoelectric Point: 7.1340

>NTDB_id=679653 OBG92_RS01995 WP_003148848.1 416887..417294(+) (pilG) [Pseudomonas aeruginosa strain Zw26]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPLDAAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=679653 OBG92_RS01995 WP_003148848.1 416887..417294(+) (pilG) [Pseudomonas aeruginosa strain Zw26]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACGCTGCT
TAAGAAGGTCGGTTGCGACGTGATCACGGCGATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCACCCGAACA
TCATCTTCGTCGACATCATGATGCCGCGCCTGGATGGCTACCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAACTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACTCCGCTGGACGCCG
CTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2R3J4N2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

42.063

93.333

0.393