Detailed information NTG0679369

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG776_RS27250
• Genome accession: NZ_CP109592
• Coordinates: 6394554..6395840 (+)
• Length: 428 a.a.
• NCBI ID: WP_148013969.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01689
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6389554..6400840

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG776_RS27220 (OG776_27210)	-	6389837..6390031 (+)	195	WP_054231893.1	hypothetical protein	-
OG776_RS27235 (OG776_27225)	tig	6391061..6392446 (+)	1386	WP_148013971.1	trigger factor	-
OG776_RS27240 (OG776_27230)	clpP	6392980..6393585 (+)	606	WP_060897745.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG776_RS27245 (OG776_27235)	clpP	6393713..6394393 (+)	681	WP_148013970.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG776_RS27250 (OG776_27240)	clpX	6394554..6395840 (+)	1287	WP_148013969.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG776_RS27255 (OG776_27245)	-	6395919..6396902 (-)	984	WP_329322679.1	hypothetical protein	-
OG776_RS27260 (OG776_27250)	-	6397038..6399668 (+)	2631	WP_329322680.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46812.59 Da
• Isoelectric Point: 4.7331

>NTDB_id=679369 OG776_RS27250 WP_148013969.1 6394554..6395840(+) (clpX) [Streptomyces sp. NBC_01689]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGGQNRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELEEKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
AALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=679369 OG776_RS27250 WP_148013969.1 6394554..6395840(+) (clpX) [Streptomyces sp. NBC_01689]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTGGAGGGGTACGTCGTCGGCCAGGAGGCC
GCCAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCGGGTGAGAACGGCGGCGGCCAGAACCG
GGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGTCCCACGGGCTCCGGCAAGACCCTGCTCGCGCAGA
CGCTCGCCCGTATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGCTACGTGGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCAGCGGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGCGAGGGTGTCCAGCAGGCAC
TGCTGAAGATCCTCGAGGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCCCGCGCGGGTGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAGCTGGAGGAGAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAATTCATCGGCCGCCTCCCGGTCATCACGTCGGTCCACAACCTCGACCGC
GCGGCGCTCCTCCAGATCCTCGTCGAACCGCGCAACGCGCTCGTCAAGCAGTACCAGCGTCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTCGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGGTCCCCTCGCGCAAGGACGTGGCGAGGGTCGTCATCACG
GCCGACGTGGTCCTGTCGAACGTCAACCCCACCCTCATCCCGCGGGACGCCCGCGGCCGGGGCTCCGGGGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521