Detailed information NTG0679280

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG467_RS29640
• Genome accession: NZ_CP109589
• Coordinates: 6584231..6585517 (+)
• Length: 428 a.a.
• NCBI ID: WP_329573396.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01361
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6579231..6590517

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG467_RS29610 (OG467_29665)	-	6580309..6580503 (+)	195	WP_100594330.1	hypothetical protein	-
OG467_RS29625 (OG467_29680)	tig	6581022..6582410 (+)	1389	WP_100594204.1	trigger factor	-
OG467_RS29630 (OG467_29685)	clpP	6582754..6583362 (+)	609	WP_329581981.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG467_RS29635 (OG467_29690)	clpP	6583416..6584075 (+)	660	WP_100594205.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG467_RS29640 (OG467_29695)	clpX	6584231..6585517 (+)	1287	WP_329573396.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG467_RS29645 (OG467_29700)	-	6585599..6586570 (-)	972	WP_329573397.1	hypothetical protein	-
OG467_RS29650 (OG467_29705)	-	6586756..6589386 (+)	2631	WP_329573398.1	valine--tRNA ligase	-
OG467_RS29655 (OG467_29710)	-	6589493..6590167 (-)	675	WP_329573399.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46834.56 Da
• Isoelectric Point: 4.8379

>NTDB_id=679280 OG467_RS29640 WP_329573396.1 6584231..6585517(+) (clpX) [Streptomyces sp. NBC_01361]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELSKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIHSKRELEEKDQFREVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILLEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRRTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
AEAVHSNVNPTLIPRDARGGGTGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=679280 OG467_RS29640 WP_329573396.1 6584231..6585517(+) (clpX) [Streptomyces sp. NBC_01361]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAAGAACTTCCCAAGCCTCGCGAGATCTACGAGTTCCTCGAGGGCTATGTCGTCGGCCAGGAGGCC
GCGAAGAAAGCCCTCTCGGTCGCTGTGTACAACCATTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGAGCCCAGGGACG
CGACGACGCGATCGAGTTGTCGAAGTCCAACATCCTGCTCCTGGGCCCCACGGGCTCGGGCAAGACCCTCCTGGCCCAGA
CCCTGGCCCGCATGCTGAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTCACGGAGGCCGGCTATGTGGGCGAGGAC
GTCGAGAACATCCTCCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAGAACCCGTCGATCACGCGCGATGTGTCCGGTGAGGGTGTCCAGCAGGCCC
TGCTCAAGATCCTCGAAGGGACCACGGCTTCCGTCCCGCCCCAGGGCGGCCGCAAGCACCCCCATCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCACTCCAAGCGCGAGCTGGAGGAGAAGGACCAGTTCCGGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTCCAGATCCTCCTGGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTGCGCCGCACCGGCGCGCGCGGCCTGC
GCGCGATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTCCCCTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCAGAGGCCGTCCACTCGAACGTGAACCCGACGCTGATCCCGCGGGATGCGCGGGGCGGGGGTACGGGGGAGCAGAAGTC
CGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.184	93.925	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.745	96.028	0.526