Detailed information NTG0679080

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG465_RS19060
• Genome accession: NZ_CP109580
• Coordinates: 4006681..4007967 (-)
• Length: 428 a.a.
• NCBI ID: WP_030008569.1
• Uniprot ID: A0ABQ3SUV3
• Organism: Streptomyces sp. NBC_01367
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4001681..4012967

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG465_RS19050 (OG465_19005)	-	4002886..4005534 (-)	2649	WP_328790441.1	valine--tRNA ligase	-
OG465_RS19055 (OG465_19010)	-	4005662..4006603 (+)	942	WP_405787236.1	hypothetical protein	-
OG465_RS19060 (OG465_19015)	clpX	4006681..4007967 (-)	1287	WP_030008569.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG465_RS19065 (OG465_19020)	clpP	4008121..4008786 (-)	666	WP_150257432.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG465_RS19070 (OG465_19025)	clpP	4008841..4009458 (-)	618	WP_405787239.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG465_RS19075 (OG465_19030)	tig	4009739..4011127 (-)	1389	WP_328790439.1	trigger factor	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46962.87 Da
• Isoelectric Point: 4.7778

>NTDB_id=679080 OG465_RS19060 WP_030008569.1 4006681..4007967(-) (clpX) [Streptomyces sp. NBC_01367]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
SEVVRSNVNPTLVPRIVPKDQGPHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=679080 OG465_RS19060 WP_030008569.1 4006681..4007967(-) (clpX) [Streptomyces sp. NBC_01367]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTTTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAAGAGGAACTCGCGGAGACCT
CCGAGGTCCGGTGGGAGGAACTCCCCAAGCCCCGTGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCCGTAGCGGTCTACAACCACTACAAGCGCGTGCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCGGGCAAGACGCTGCTCGCGCAGA
CCCTCGCCCGCATGCTGAACGTCCCCTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGCGAGGGCGTGCAGCAGGCCC
TCCTGAAGATCCTGGAAGGCACGACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGCGC
CAAGGGCATCGGCTTCGGGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCCAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTTCCCGTGCTGACCTCCGTGCACAACCTGGACCGT
GAGGCCCTGCTCCAGATCCTGATCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCGGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
TCGGAGGTGGTCCGCTCCAACGTCAACCCGACGCTGGTCCCCCGGATCGTCCCGAAGGACCAGGGTCCGCACGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.925	0.6
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519