Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MYA84_RS03410 Genome accession   NZ_CP095872
Coordinates   708197..708580 (+) Length   127 a.a.
NCBI ID   WP_004814763.1    Uniprot ID   -
Organism   Acinetobacter schindleri strain H4-3-C1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 703197..713580
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MYA84_RS03400 (MYA84_03395) - 706045..707178 (-) 1134 WP_048882365.1 efflux RND transporter periplasmic adaptor subunit -
  MYA84_RS03405 (MYA84_03400) - 707230..707889 (-) 660 WP_048882366.1 hypothetical protein -
  MYA84_RS03410 (MYA84_03405) pilG 708197..708580 (+) 384 WP_004814763.1 twitching motility response regulator PilG Regulator
  MYA84_RS03415 (MYA84_03410) - 708611..708979 (+) 369 WP_004814764.1 response regulator -
  MYA84_RS03420 (MYA84_03415) - 708985..709521 (+) 537 WP_004814765.1 chemotaxis protein CheW -
  MYA84_RS03425 (MYA84_03420) - 709566..711638 (+) 2073 WP_004814766.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14201.30 Da        Isoelectric Point: 4.7172

>NTDB_id=678946 MYA84_RS03410 WP_004814763.1 708197..708580(+) (pilG) [Acinetobacter schindleri strain H4-3-C1]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQSYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLTAIRNHISA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=678946 MYA84_RS03410 WP_004814763.1 708197..708580(+) (pilG) [Acinetobacter schindleri strain H4-3-C1]
ATGGACGATAAATTCCAAAATCTAAAAGTGATGGTCATTGATGATTCAAAAACCATTCGTCGTACAGCAGAAACTCTTCT
TCAGCGTGAAGGTTGTGAAGTGATTACCGCAGTAGACGGTTTTGAAGCATTGTCAAAAATTGCAGAAGCAAATCCCGACA
TCGTTTTTGTAGATATCATGATGCCTCGCCTTGATGGTTATCAGACTTGTGCCTTAATTAAAAACTCGCAAAGTTATCAG
AACATTCCTGTTATTATGCTATCGAGTAAAGATGGTTTGTTCGATCAGGCCAAAGGCCGTGTGGTTGGTTCAGATGAATA
TCTCACCAAGCCATTTAGCAAAGATGAGTTGCTTACCGCAATCCGCAACCATATCAGTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37