Detailed information NTG0678866

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG209_RS27600
• Genome accession: NZ_CP109561
• Coordinates: 6119362..6120660 (+)
• Length: 432 a.a.
• NCBI ID: WP_123471015.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01383
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6114362..6125660

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG209_RS27570 (OG209_27560)	-	6115390..6115584 (+)	195	WP_123471025.1	hypothetical protein	-
OG209_RS27585 (OG209_27575)	tig	6116164..6117570 (+)	1407	WP_123471022.1	trigger factor	-
OG209_RS27590 (OG209_27580)	-	6117836..6118441 (+)	606	WP_164494417.1	ATP-dependent Clp protease proteolytic subunit	-
OG209_RS27595 (OG209_27585)	clpP	6118521..6119204 (+)	684	WP_123471017.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG209_RS27600 (OG209_27590)	clpX	6119362..6120660 (+)	1299	WP_123471015.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG209_RS27605 (OG209_27595)	-	6120733..6121725 (-)	993	WP_266412026.1	hypothetical protein	-
OG209_RS27610 (OG209_27600)	-	6121876..6124497 (+)	2622	WP_123471010.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47305.12 Da
• Isoelectric Point: 4.7809

>NTDB_id=678866 OG209_RS27600 WP_123471015.1 6119362..6120660(+) (clpX) [Streptomyces sp. NBC_01383]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGTGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDDGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=678866 OG209_RS27600 WP_123471015.1 6119362..6120660(+) (clpX) [Streptomyces sp. NBC_01383]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
TGCGGGACCCGGTGTCTACATCTGCGACGAGTGCATTGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTAGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCCGGGGAGAACGGCGGCGGGACGGGCCG
TGACGACGCGATCGAACTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCGCAGA
CACTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGTTGTTCATCGTGGGCGGCGCGTTCTCCGGCCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
GAAGGGCATCGGTTTCGGCGCCACGATCCGCTCCAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGTGCGCGCGGTCTGC
GCGCCATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCGGACGTGGTCCGCAACAACGTCAACCCGACCCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGCGACGACGGGCG
GCACGAGAAGTCGGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.056	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509