Detailed information NTG0678575

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG204_RS11605
• Genome accession: NZ_CP109556
• Coordinates: 2556870..2558162 (-)
• Length: 430 a.a.
• NCBI ID: WP_250298433.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01387
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2551870..2563162

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG204_RS11590 (OG204_11610)	-	2551934..2552947 (+)	1014	WP_250298430.1	rod shape-determining protein	-
OG204_RS11595 (OG204_11615)	-	2553023..2555644 (-)	2622	WP_266643185.1	valine--tRNA ligase	-
OG204_RS11600 (OG204_11620)	-	2555783..2556802 (+)	1020	WP_405685048.1	hypothetical protein	-
OG204_RS11605 (OG204_11625)	clpX	2556870..2558162 (-)	1293	WP_250298433.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG204_RS11610 (OG204_11630)	clpP	2558320..2559003 (-)	684	WP_284347844.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG204_RS11615 (OG204_11635)	-	2559054..2559659 (-)	606	WP_250298549.1	ATP-dependent Clp protease proteolytic subunit	-
OG204_RS11620 (OG204_11640)	tig	2559951..2561357 (-)	1407	WP_250298435.1	trigger factor	-
OG204_RS11635 (OG204_11655)	-	2561854..2562048 (-)	195	WP_250298436.1	hypothetical protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47145.90 Da
• Isoelectric Point: 4.7809

>NTDB_id=678575 OG204_RS11605 WP_250298433.1 2556870..2558162(-) (clpX) [Streptomyces sp. NBC_01387]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGTNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPSLEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRDNVNPTLVPREPRIVGNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=678575 OG204_RS11605 WP_250298433.1 2556870..2558162(-) (clpX) [Streptomyces sp. NBC_01387]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGGGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAAGAGGAACTCGCGGAGACCT
CCGAAGTGCGGTGGGAGGAACTGCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCTCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGGGACCAACCG
CGAGGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACACTGCTCGCCCAGA
CCCTGGCCCGGATGCTCAACGTCCCGTTCGCCATTGCGGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAGGGCACGACCGCCTCGGTACCGCCGCAGGGCGGCCGTAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCCGGTCTGGAGCGGATCATCGAGTCCCGGGCGGGCGC
GAAGGGCATCGGCTTCGGCGCGACCATCCGTTCCAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTGCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTTCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGACCGCCCGTCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGGGCGCGTGGGCTGC
GCGCCATCATGGAAGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCGGACGTCGTCCGGGACAACGTGAACCCGACGCTGGTCCCGCGCGAGCCGCGGATCGTGGGCAACGACGGCCGCCACGA
GAAGTCCGCCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.184	93.488	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.155	95.814	0.509