Detailed information NTG0677978

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG906_RS22505
• Genome accession: NZ_CP109500
• Coordinates: 5075698..5076984 (+)
• Length: 428 a.a.
• NCBI ID: WP_053674927.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01426
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5070698..5081984

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG906_RS22470 (OG906_22465)	-	5071164..5071358 (+)	195	WP_053674919.1	hypothetical protein	-
OG906_RS22475 (OG906_22470)	-	5071508..5071693 (-)	186	WP_329445274.1	hypothetical protein	-
OG906_RS22490 (OG906_22485)	tig	5072507..5073901 (+)	1395	WP_329445276.1	trigger factor	-
OG906_RS22495 (OG906_22490)	-	5074199..5074816 (+)	618	WP_053674923.1	ATP-dependent Clp protease proteolytic subunit	-
OG906_RS22500 (OG906_22495)	clpP	5074870..5075544 (+)	675	WP_053674925.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG906_RS22505 (OG906_22500)	clpX	5075698..5076984 (+)	1287	WP_053674927.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG906_RS22510 (OG906_22505)	-	5077067..5078032 (-)	966	WP_329445279.1	hypothetical protein	-
OG906_RS22515 (OG906_22510)	-	5078238..5080859 (+)	2622	WP_329445281.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46957.85 Da
• Isoelectric Point: 4.8265

>NTDB_id=677978 OG906_RS22505 WP_053674927.1 5075698..5076984(+) (clpX) [Streptomyces sp. NBC_01426]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKREIEASDQFHEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVRSNVNPTLVPRIVPKDQGPHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=677978 OG906_RS22505 WP_053674927.1 5075698..5076984(+) (clpX) [Streptomyces sp. NBC_01426]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAAGAGGAACTCGCGGAGACCT
CCGAGGTTCGGTGGGAGGAACTCCCCAAGCCCCGTGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCCGTCGCGGTCTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTGCTGCTGGGCCCGACGGGTTCCGGCAAGACGCTGTTGGCGCAGA
CGCTGGCCCGCATGCTCAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTGAGCGGCGAGGGCGTGCAGCAGGCCC
TCCTGAAGATCCTGGAAGGCACGACGGCCTCCGTCCCGCCGCAGGGCGGGCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCGTTCTCGGGTCTGGAGAAGATCATCGAGTCGCGCGCGGGCGC
CAAGGGCATCGGCTTCGGTGCGACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCACGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGTCGTCTGCCCGTGCTGACCTCCGTGCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTGATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
CGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACGGGTGCGCGAGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCTCGCAAGGACGTGGCCCGCGTGGTCATCACT
GCGGATGTCGTCCGCTCCAACGTCAACCCGACGCTGGTCCCGCGGATCGTCCCGAAGGACCAGGGCCCGCACGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.925	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.028	0.516