Detailed information    

insolico Bioinformatically predicted

Overview

Name   degS   Type   Regulator
Locus tag   MX663_RS19085 Genome accession   NZ_CP095736
Coordinates   3638701..3639858 (-) Length   385 a.a.
NCBI ID   WP_003227983.1    Uniprot ID   A0A199WDV9
Organism   Bacillus subtilis strain N4     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context

Location: 3633701..3644858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MX663_RS19055 (MX663_19055) yvyF 3633955..3634374 (-) 420 WP_003227995.1 TIGR03826 family flagellar region protein -
  MX663_RS19060 (MX663_19060) comFC 3634447..3635169 (-) 723 WP_247470847.1 comF operon protein ComFC Machinery gene
  MX663_RS19065 (MX663_19065) comFB 3635133..3635429 (-) 297 WP_015483764.1 late competence protein ComFB -
  MX663_RS19070 (MX663_19070) comFA 3635489..3636880 (-) 1392 WP_247470850.1 ATP-dependent helicase ComFA Machinery gene
  MX663_RS19075 (MX663_19075) fakBA 3636986..3637831 (-) 846 WP_076457520.1 DegV family protein -
  MX663_RS19080 (MX663_19080) degU 3637929..3638618 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  MX663_RS19085 (MX663_19085) degS 3638701..3639858 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  MX663_RS19090 (MX663_19090) yvyE 3640075..3640728 (+) 654 WP_003227979.1 YigZ family protein -
  MX663_RS19095 (MX663_19095) tagV 3640728..3641903 (+) 1176 WP_247470853.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  MX663_RS19100 (MX663_19100) tagO 3641975..3643051 (-) 1077 WP_003227975.1 MraY family glycosyltransferase -
  MX663_RS19105 (MX663_19105) tuaH 3643196..3644389 (-) 1194 WP_247471900.1 glycosyltransferase family 1 protein -

Sequence

Protein


Download         Length: 385 a.a.        Molecular weight: 44957.76 Da        Isoelectric Point: 6.2957

>NTDB_id=677894 MX663_RS19085 WP_003227983.1 3638701..3639858(-) (degS) [Bacillus subtilis strain N4]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=677894 MX663_RS19085 WP_003227983.1 3638701..3639858(-) (degS) [Bacillus subtilis strain N4]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTTGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(180-248)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(291-384)

Sensor protein DegS (DegS)

(12-170)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WDV9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

100

100

1