Detailed information NTG0677753

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG769_RS24375
• Genome accession: NZ_CP109492
• Coordinates: 5590886..5592184 (+)
• Length: 432 a.a.
• NCBI ID: WP_093542560.1
• Uniprot ID: A0ABW1GPA4
• Organism: Streptomyces sp. NBC_01435
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5585886..5597184

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG769_RS24345 (OG769_24325)	-	5586872..5587066 (+)	195	WP_093542552.1	hypothetical protein	-
OG769_RS24360 (OG769_24340)	tig	5587702..5589096 (+)	1395	WP_329198693.1	trigger factor	-
OG769_RS24365 (OG769_24345)	-	5589362..5589967 (+)	606	WP_329202714.1	ATP-dependent Clp protease proteolytic subunit	-
OG769_RS24370 (OG769_24350)	clpP	5590048..5590728 (+)	681	WP_329198695.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG769_RS24375 (OG769_24355)	clpX	5590886..5592184 (+)	1299	WP_093542560.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG769_RS24380 (OG769_24360)	-	5592259..5593299 (-)	1041	WP_329202715.1	hypothetical protein	-
OG769_RS24385 (OG769_24365)	-	5593453..5596074 (+)	2622	WP_329198698.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47243.06 Da
• Isoelectric Point: 4.8824

>NTDB_id=677753 OG769_RS24375 WP_093542560.1 5590886..5592184(+) (clpX) [Streptomyces sp. NBC_01435]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=677753 OG769_RS24375 WP_093542560.1 5590886..5592184(+) (clpX) [Streptomyces sp. NBC_01435]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGATGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGTGAGAACGGCGGCGCCCAGGGCCG
GGACGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCTTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCCGGTCTGGAGCGGATCATCGAGTCCCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGTTCCAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAATTCATCGGCCGCCTCCCCGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTCCAGATCCTCATCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
CGAGCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGTGGCCTGC
GGGCCATCATGGAGGAGGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCGGACGTCGTCCGCAACAACGTGAACCCGACGCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGCGACGGCGGGCG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509