Detailed information NTG0677671

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG281_RS22265
• Genome accession: NZ_CP109488
• Coordinates: 4934871..4936169 (+)
• Length: 432 a.a.
• NCBI ID: WP_024492987.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01438
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4929871..4941169

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG281_RS22235 (OG281_22250)	-	4930899..4931093 (+)	195	WP_145763503.1	hypothetical protein	-
OG281_RS22250 (OG281_22265)	tig	4931687..4933084 (+)	1398	WP_371773186.1	trigger factor	-
OG281_RS22255 (OG281_22270)	-	4933349..4933954 (+)	606	WP_199884549.1	ATP-dependent Clp protease proteolytic subunit	-
OG281_RS22260 (OG281_22275)	clpP	4934030..4934713 (+)	684	WP_024492986.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG281_RS22265 (OG281_22280)	clpX	4934871..4936169 (+)	1299	WP_024492987.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG281_RS22270 (OG281_22285)	-	4936245..4937249 (-)	1005	WP_371773187.1	hypothetical protein	-
OG281_RS22275 (OG281_22290)	-	4937400..4940021 (+)	2622	WP_371773188.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47378.17 Da
• Isoelectric Point: 4.7809

>NTDB_id=677671 OG281_RS22265 WP_024492987.1 4934871..4936169(+) (clpX) [Streptomyces sp. NBC_01438]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGASRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
SDVVRNNVNPTLVPREPRTIGKNDDGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=677671 OG281_RS22265 WP_024492987.1 4934871..4936169(+) (clpX) [Streptomyces sp. NBC_01438]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATTGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTTCCCAAACCGCGCGAGATCTACGAGTTCCTTGAGGGGTACGTCGTAGGCCAGGAGCCC
GCGAAGAAGGCTCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGGCGGCGGGGCGAGCCG
TGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGTTCGGGCAAGACCCTCCTCGCGCAGA
CACTGGCCCGGATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGTGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGTGGCGCGTTCTCCGGCCTGGAGAAGATCATCGAGTCCAGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCGGACCAGGCGATCCTGCGCCAGACCGGCGCCCGGGGCCTGC
GCGCGATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
TCGGACGTGGTCCGCAACAACGTCAACCCGACCCTGGTCCCGCGCGAGCCGCGGACGATCGGGAAGAACGACGACGGCAG
GCACGAGAAGTCGGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	64.268	93.287	0.6
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509