Detailed information NTG0677473

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: MXB02_RS07820
• Genome accession: NZ_CP095556
• Coordinates: 1711186..1713402 (+)
• Length: 738 a.a.
• NCBI ID: WP_247284227.1
• Uniprot ID: -
• Organism: Pseudomonas mosselii strain 923
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1706186..1718402

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MXB02_RS07790 (MXB02_07790)	-	1707148..1707387 (-)	240	WP_028690971.1	DUF3077 domain-containing protein	-
MXB02_RS07795 (MXB02_07795)	-	1707384..1707623 (-)	240	WP_062573271.1	hypothetical protein	-
MXB02_RS07800 (MXB02_07800)	-	1708053..1708676 (+)	624	WP_069017520.1	glutathione S-transferase	-
MXB02_RS07805 (MXB02_07805)	-	1708808..1709740 (+)	933	WP_028690973.1	ABC transporter ATP-binding protein	-
MXB02_RS07810 (MXB02_07810)	-	1709737..1710516 (+)	780	WP_028690974.1	ABC transporter permease	-
MXB02_RS07815 (MXB02_07815)	-	1710400..1711041 (-)	642	WP_139121109.1	DUF2062 domain-containing protein	-
MXB02_RS07820 (MXB02_07820)	comA	1711186..1713402 (+)	2217	WP_247284227.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
MXB02_RS07825 (MXB02_07825)	exbB	1713585..1714220 (+)	636	WP_028690976.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
MXB02_RS07830 (MXB02_07830)	-	1714217..1714651 (+)	435	WP_028690977.1	biopolymer transporter ExbD	-
MXB02_RS07835 (MXB02_07835)	lpxK	1714651..1715655 (+)	1005	WP_062361664.1	tetraacyldisaccharide 4'-kinase	-
MXB02_RS07840 (MXB02_07840)	-	1715690..1715875 (+)	186	WP_011532874.1	Trm112 family protein	-
MXB02_RS07845 (MXB02_07845)	kdsB	1715872..1716636 (+)	765	WP_247284228.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
MXB02_RS07850 (MXB02_07850)	-	1716636..1717100 (+)	465	WP_028690980.1	low molecular weight protein-tyrosine-phosphatase	-
MXB02_RS07855 (MXB02_07855)	murB	1717097..1718116 (+)	1020	WP_247284229.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 738 a.a.
• Molecular weight: 79814.54 Da
• Isoelectric Point: 11.1091

>NTDB_id=677473 MXB02_RS07820 WP_247284227.1 1711186..1713402(+) (comA) [Pseudomonas mosselii strain 923]
MRTGMLALVLGLLSLRFLPALPPVGWLIPLLLLALACLRTRARPLGWFVLGGCWACWSAQQALDDRLPAALDGRTLWLEG
RVVGLPTRTERGVRFELEQPQSRRARLPQRVQLSWFEGPPLRAGEHWRLAVNLRRPQGLLNPHGPDQEATLLARRVGATG
TVKAGMRQGEEASSWRDGLRQRLLATDAHGREAALAALVLGDGAGLAREDWQVLQATGTVHLLVISGQHIGLLAGLVYGL
VAGLARLGGWPRRLPWLPWACGLAMAAALGYGWLAGFGVPVQRACLMLAVVLLWRLRFRHLGAWVPLLMALSGVLLVEPL
ASLLPGFWLSFAAVAVLVLCFAARLGAWRPWQAWTRAQWVIAVGLLPVLLALGLPVSLSAPLANLLAVPWLSWGVLPLAL
LGTALLPVPGLGEGMLWLAGLSLDGLFAVLTRLAGLRPAWIPEPLPLWAWLLVCLGAVLVLLPRGVPLRAPGVVLLLALW
APREQVPPGQVEVWQLDVGQGLAVLLRTRNHALLYDAGPAQGGSDLGETVVLPTLRKLGVKALDVMLISHGHADHAGGAA
AVRRGVSVARVLAGEVAGLEAASLCRSGERWQWDGVDFELWHWPQGASSNERSCVLRVQAKGERLLLAGDMEAGAERAWL
AATDDPRVDWLQAPHHGSRTSSSEPFVQATAPRGVLVSRGRHNGFGHPHGQVIERYRRHGVVVHDTALEGALRLVLGSRG
GVEGVRRERRFWREVDEG

Nucleotide

• Length: 2217 bp

>NTDB_id=677473 MXB02_RS07820 WP_247284227.1 1711186..1713402(+) (comA) [Pseudomonas mosselii strain 923]
ATGCGCACAGGGATGCTGGCGCTGGTCCTCGGGCTGTTGAGCCTGCGCTTTTTACCTGCCCTGCCACCGGTCGGATGGCT
GATTCCATTGCTGTTGCTGGCCCTGGCCTGCCTGCGCACCCGGGCCAGGCCGCTGGGTTGGTTCGTGCTGGGTGGCTGCT
GGGCCTGCTGGTCGGCGCAGCAGGCCCTGGACGACCGCCTGCCGGCCGCGCTGGATGGCCGCACGCTGTGGCTGGAGGGG
CGGGTGGTCGGCCTGCCGACCCGTACCGAGCGCGGCGTGCGTTTCGAGCTGGAGCAGCCGCAGTCACGTCGGGCCCGGTT
GCCGCAGCGGGTGCAATTGAGCTGGTTCGAGGGGCCGCCGCTGCGAGCGGGGGAGCACTGGCGGCTGGCGGTCAACCTGC
GTCGGCCGCAGGGCCTGCTCAACCCCCATGGCCCGGATCAGGAGGCCACGCTGTTGGCGCGGCGGGTCGGTGCCACCGGC
ACGGTCAAGGCCGGCATGCGCCAGGGCGAGGAGGCCAGCAGTTGGCGCGACGGCCTGCGCCAGCGCCTGCTGGCCACCGA
TGCCCATGGCCGGGAGGCGGCGTTGGCCGCCCTGGTGCTCGGGGATGGCGCAGGCCTGGCGCGGGAGGACTGGCAGGTGC
TGCAGGCCACCGGCACGGTACACCTGCTGGTGATTTCCGGGCAGCACATCGGCTTGCTGGCCGGATTGGTCTACGGGCTG
GTGGCGGGGCTGGCACGCCTGGGGGGGTGGCCACGGCGCCTGCCGTGGCTGCCCTGGGCCTGTGGCCTGGCGATGGCGGC
GGCATTGGGCTACGGCTGGCTGGCGGGGTTCGGCGTGCCGGTGCAGCGGGCGTGCCTGATGCTGGCGGTGGTGCTGCTCT
GGCGCTTGCGCTTTCGCCATCTGGGCGCCTGGGTGCCGTTGCTGATGGCGCTGTCGGGCGTGCTGCTGGTCGAGCCGCTG
GCCAGCCTGTTGCCGGGTTTCTGGCTGTCGTTCGCTGCCGTGGCGGTGCTGGTGCTGTGTTTTGCCGCCCGGCTGGGTGC
CTGGCGGCCCTGGCAGGCCTGGACCCGCGCCCAGTGGGTGATCGCCGTGGGGTTGCTGCCGGTGCTGCTGGCCTTGGGGC
TGCCCGTCAGTCTCAGCGCGCCGCTGGCCAATCTGCTGGCGGTGCCGTGGCTCAGCTGGGGCGTGCTGCCGTTGGCGTTG
CTGGGTACGGCCCTGCTGCCGGTGCCTGGGCTGGGGGAGGGGATGCTGTGGCTGGCGGGCCTGTCGTTGGATGGGTTGTT
TGCCGTGCTGACGCGATTGGCAGGGCTGCGGCCGGCCTGGATTCCCGAGCCACTGCCGTTGTGGGCCTGGCTGCTGGTGT
GCCTGGGCGCCGTGCTGGTGTTGCTGCCCCGGGGCGTGCCGTTGCGGGCGCCGGGCGTGGTCCTGCTGTTGGCGCTGTGG
GCGCCACGCGAACAGGTGCCGCCGGGGCAGGTGGAGGTCTGGCAGCTGGATGTGGGGCAGGGCCTGGCGGTGCTGCTGCG
CACCCGCAATCACGCGCTGCTGTATGACGCAGGCCCGGCCCAGGGTGGCAGTGACCTGGGCGAGACGGTGGTGCTGCCGA
CCTTGCGCAAGCTTGGGGTGAAGGCGCTGGACGTGATGCTGATCAGCCATGGCCATGCCGACCATGCCGGTGGGGCGGCG
GCCGTGCGGCGTGGGGTTTCGGTGGCGCGAGTGCTGGCCGGCGAGGTTGCCGGGCTGGAAGCGGCCTCGCTGTGCCGCAG
TGGCGAGCGCTGGCAGTGGGATGGCGTCGATTTCGAGCTCTGGCACTGGCCGCAGGGGGCTTCCAGCAACGAACGCTCCT
GTGTGTTGCGCGTGCAGGCCAAGGGCGAACGCCTGCTGCTGGCCGGGGACATGGAGGCCGGCGCGGAGCGGGCCTGGCTG
GCCGCGACCGACGATCCTCGGGTGGACTGGTTGCAGGCGCCGCACCATGGCAGCCGCACGTCGTCCAGCGAGCCGTTCGT
CCAGGCCACGGCGCCGCGCGGGGTGTTGGTTTCCCGGGGGCGGCACAATGGTTTCGGGCATCCCCATGGGCAGGTGATCG
AGCGCTATCGCCGGCACGGGGTGGTGGTGCATGACACGGCGTTGGAGGGGGCGTTGCGGTTGGTGCTGGGGAGTCGGGGT
GGGGTGGAAGGTGTGCGCAGGGAGCGGCGGTTCTGGCGTGAGGTTGACGAGGGCTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (497-664)

• Domain of unknown function (DUF4131) (DUF4131) (20-164)

• Competence protein (Competence) (198-462)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	60.083	97.425	0.585
comA	Ralstonia pseudosolanacearum GMI1000	35.514	100	0.412