Detailed information NTG0677419

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG568_RS33015
• Genome accession: NZ_CP109480
• Coordinates: 7415371..7416657 (+)
• Length: 428 a.a.
• NCBI ID: WP_054231969.1
• Uniprot ID: A0ABU3UTX5
• Organism: Streptomyces sp. NBC_01450
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7410371..7421657

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG568_RS32985 (OG568_33035)	-	7410745..7411242 (-)	498	WP_329534181.1	DUF4265 domain-containing protein	-
OG568_RS33000 (OG568_33050)	tig	7411914..7413320 (+)	1407	WP_329534182.1	trigger factor	-
OG568_RS33005 (OG568_33055)	clpP	7413776..7414381 (+)	606	WP_266421778.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG568_RS33010 (OG568_33060)	clpP	7414519..7415199 (+)	681	WP_266624702.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG568_RS33015 (OG568_33065)	clpX	7415371..7416657 (+)	1287	WP_054231969.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG568_RS33020 (OG568_33070)	-	7416767..7417798 (-)	1032	WP_329534183.1	hypothetical protein	-
OG568_RS33025 (OG568_33075)	-	7417934..7420558 (+)	2625	WP_329534184.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46778.62 Da
• Isoelectric Point: 4.8201

>NTDB_id=677419 OG568_RS33015 WP_054231969.1 7415371..7416657(+) (clpX) [Streptomyces sp. NBC_01450]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGQNRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
PALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=677419 OG568_RS33015 WP_054231969.1 7415371..7416657(+) (clpX) [Streptomyces sp. NBC_01450]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAAACGA
GCGAGGTCCGCTGGGAGGAACTCCCGAAACCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGCCAGGAGTCG
GCCAAGAAGGCCCTCTCAGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGTCAGAACCG
GGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACTCTGCTCGCCCAGA
CGCTCGCGCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTCACGGAGGCGGGGTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGTAAGAGCGAAAACCCGTCGATCACGCGAGACGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTCAAGATCCTGGAGGGCACGACGGCCTCCGTTCCGCCCCAGGGCGGACGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCGAGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGCTCGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCCG
AGGACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGACTGCCCGTCATCACCTCGGTCCACAACCTCGACCGG
CCGGCGCTCCTCCAGATCCTCGTGGAGCCGCGCAACGCGCTCGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAAGCCATCGCCGACCAGGCGATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGGTTCCCTCGCGCAAGGACGTGGCGAGGGTCGTCATCACG
GCGGACGTCGTCCTGTCCAACGTCAACCCGACGCTGATCCCGCGCGACGCCCGCGGGCGTGGCCCGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521