Detailed information NTG0677320

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG595_RS28490
• Genome accession: NZ_CP109479
• Coordinates: 6486852..6488138 (+)
• Length: 428 a.a.
• NCBI ID: WP_329283274.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01451
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6481852..6493138

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG595_RS28455 (OG595_28430)	-	6481925..6482443 (+)	519	WP_329276864.1	HD domain-containing protein	-
OG595_RS28460 (OG595_28435)	-	6482649..6482843 (+)	195	WP_006383514.1	hypothetical protein	-
OG595_RS28475 (OG595_28450)	tig	6483446..6484858 (+)	1413	WP_329276866.1	trigger factor	-
OG595_RS28480 (OG595_28455)	clpP	6485312..6485920 (+)	609	WP_329283272.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG595_RS28485 (OG595_28460)	clpP	6485970..6486668 (+)	699	WP_329276868.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG595_RS28490 (OG595_28465)	clpX	6486852..6488138 (+)	1287	WP_329283274.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG595_RS28495 (OG595_28470)	-	6488324..6488602 (+)	279	WP_329276870.1	hypothetical protein	-
OG595_RS28500 (OG595_28475)	-	6488656..6489657 (-)	1002	WP_329276871.1	hypothetical protein	-
OG595_RS28505 (OG595_28480)	-	6489794..6492424 (+)	2631	WP_329276872.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46871.76 Da
• Isoelectric Point: 4.8809

>NTDB_id=677320 OG595_RS28490 WP_329283274.1 6486852..6488138(+) (clpX) [Streptomyces sp. NBC_01451]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENSGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKREMENKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
KALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=677320 OG595_RS28490 WP_329283274.1 6486852..6488138(+) (clpX) [Streptomyces sp. NBC_01451]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAAAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GTGAGGTCAGGTGGGAGGAACTCCCCAAGCCTCGCGAGATCTACGAGTTCCTCGAGGGGTACGTAGTCGGTCAGGAGTCG
GCCAAGAAGGCCCTGTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACAGCGGCGGTCAAAGCCG
TGAGGACGCCATCGAGTTGGCGAAGTCGAACATCCTCCTGCTGGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCGCAGA
CACTGGCGCGCATGCTGAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGGTATGTCGGCGAGGAC
GTCGAGAACATCCTGTTGAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAAACCGGAATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGTGAAAACCCGTCGATCACGCGTGACGTGTCCGGCGAGGGCGTCCAGCAGGCTC
TGCTGAAGATCCTCGAAGGCACGACGGCCTCGGTCCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGTGGTGCCTTCGCCGGCCTGGAGAAGCTCATCGAGTCGAGGGCGGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGATGGAGAACAAGGACCAGTTCGAGGCGGTCATGCCCG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCCGTGATCACCTCGGTCCACAACCTGGACCGC
AAGGCGCTCCTGCAGATCCTGGTGGAGCCGCGCAACGCCCTCGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCCCGTGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACG
GCGGACGTCGTCCTGTCGAACGTGAACCCGACCCTGATCCCGAGGGACGCGCGCGGGCGCGGCCCGGGGGAGCAGAAGAC
GGCATAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.035	94.159	0.584
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521