Detailed information    

insolico Bioinformatically predicted

Overview

Name   comFC   Type   Machinery gene
Locus tag   MW696_RS12565 Genome accession   NZ_CP095476
Coordinates   2420789..2421523 (-) Length   244 a.a.
NCBI ID   WP_048353651.1    Uniprot ID   A0A0J6ESL8
Organism   Bacillus glycinifermentans strain MGMM1     
Function   ssDNA transport into the cell (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2415789..2426523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MW696_RS12530 (MW696_12535) fliW 2415936..2416367 (-) 432 WP_048354941.1 flagellar assembly protein FliW -
  MW696_RS12535 (MW696_12540) - 2416389..2416955 (-) 567 WP_048354940.1 DUF6470 family protein -
  MW696_RS12540 (MW696_12545) flgL 2417000..2417917 (-) 918 WP_048405775.1 flagellar hook-associated protein FlgL -
  MW696_RS12545 (MW696_12550) flgK 2417927..2419450 (-) 1524 WP_247069617.1 flagellar hook-associated protein FlgK -
  MW696_RS12550 (MW696_12555) - 2419468..2419944 (-) 477 WP_048354938.1 flagellar protein FlgN -
  MW696_RS12555 (MW696_12560) flgM 2419966..2420232 (-) 267 WP_048405767.1 flagellar biosynthesis anti-sigma factor FlgM -
  MW696_RS12560 (MW696_12565) - 2420312..2420731 (-) 420 WP_048353652.1 TIGR03826 family flagellar region protein -
  MW696_RS12565 (MW696_12570) comFC 2420789..2421523 (-) 735 WP_048353651.1 amidophosphoribosyltransferase Machinery gene
  MW696_RS12570 (MW696_12575) - 2421480..2421764 (-) 285 WP_048353650.1 competence protein ComFB -
  MW696_RS12575 (MW696_12580) comFA 2421820..2423214 (-) 1395 WP_232517731.1 DEAD/DEAH box helicase Machinery gene
  MW696_RS12580 (MW696_12585) - 2423348..2424190 (-) 843 WP_048405768.1 DegV family protein -
  MW696_RS12585 (MW696_12590) degU 2424312..2425001 (-) 690 WP_046130088.1 two-component system response regulator DegU Regulator
  MW696_RS12590 (MW696_12595) degS 2425084..2426241 (-) 1158 WP_247069620.1 histidine kinase Regulator

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 27805.32 Da        Isoelectric Point: 9.3753

>NTDB_id=677164 MW696_RS12565 WP_048353651.1 2420789..2421523(-) (comFC) [Bacillus glycinifermentans strain MGMM1]
MKIRIANTERKEGCKLLCLICEAPLSHSLSWETFFFTHDEEKICGECKEGFIKIKGTVCRKCGRLQDGEKLCTDCLKWEA
NPKTRGLLEQNRSVYLYNPFMKEVLARFKFRGDAEIVHAFAPSFVRTFQACCRHTDAAIVPMPLSEERKKERGFNQAERL
ASLLKRPVIHPLIRTENEKQSKKSRAERLKQKNVFKTDKGSVKGMKILLIDDLYTTGATVHQAAQCLKADGEADSVSSFT
LIRS

Nucleotide


Download         Length: 735 bp        

>NTDB_id=677164 MW696_RS12565 WP_048353651.1 2420789..2421523(-) (comFC) [Bacillus glycinifermentans strain MGMM1]
ATGAAAATCCGCATTGCGAATACAGAAAGAAAGGAAGGGTGTAAGCTGCTTTGTTTAATTTGTGAAGCTCCTCTTTCACA
TTCTCTTTCATGGGAGACTTTTTTCTTTACTCATGACGAGGAAAAAATATGCGGAGAATGTAAGGAGGGCTTTATCAAAA
TAAAAGGGACCGTTTGCCGTAAATGCGGGCGTCTTCAAGACGGCGAAAAGCTGTGCACCGACTGTCTAAAATGGGAAGCA
AATCCGAAAACCCGAGGCCTCCTTGAACAAAACCGCTCTGTATATCTTTACAATCCCTTCATGAAAGAAGTGCTCGCCCG
TTTTAAGTTTAGAGGCGACGCTGAAATCGTCCACGCTTTTGCCCCTTCTTTTGTCCGCACCTTTCAAGCGTGCTGCCGGC
ATACAGATGCCGCTATTGTCCCGATGCCTCTCAGCGAAGAACGCAAAAAGGAAAGAGGCTTTAATCAGGCGGAAAGGCTT
GCTTCCTTATTAAAAAGGCCTGTCATACATCCGTTGATTAGAACCGAAAATGAGAAACAGTCAAAAAAAAGCAGGGCAGA
GCGCCTTAAACAAAAAAACGTTTTTAAAACGGACAAGGGTTCTGTAAAAGGCATGAAAATTCTTCTGATTGATGACCTGT
ATACGACAGGGGCCACCGTTCATCAAGCTGCCCAATGTCTGAAAGCGGACGGAGAAGCAGATTCGGTATCATCTTTCACT
TTGATTCGAAGCTAA

Domains

Predicted by InterproScan.

Double zinc ribbon domain (DZR_2)

(18-76)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0J6ESL8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comFC Bacillus subtilis subsp. subtilis str. 168

52.609

94.262

0.496