Detailed information NTG0677048

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG488_RS12740
• Genome accession: NZ_CP109473
• Coordinates: 2866680..2867978 (-)
• Length: 432 a.a.
• NCBI ID: WP_103516222.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01460
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2861680..2872978

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG488_RS12730 (OG488_12725)	-	2862846..2865467 (-)	2622	WP_329228834.1	valine--tRNA ligase	-
OG488_RS12735 (OG488_12730)	-	2865605..2866609 (+)	1005	WP_329228836.1	hypothetical protein	-
OG488_RS12740 (OG488_12735)	clpX	2866680..2867978 (-)	1299	WP_103516222.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG488_RS12745 (OG488_12740)	clpP	2868136..2868819 (-)	684	WP_329228840.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG488_RS12750 (OG488_12745)	-	2868887..2869492 (-)	606	WP_198959691.1	ATP-dependent Clp protease proteolytic subunit	-
OG488_RS12755 (OG488_12750)	tig	2869791..2871188 (-)	1398	WP_329228842.1	trigger factor	-
OG488_RS12770 (OG488_12765)	-	2871858..2872052 (-)	195	WP_069172794.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47343.18 Da
• Isoelectric Point: 4.8277

>NTDB_id=677048 OG488_RS12740 WP_103516222.1 2866680..2867978(-) (clpX) [Streptomyces sp. NBC_01460]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGANRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
PDVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=677048 OG488_RS12740 WP_103516222.1 2866680..2867978(-) (clpX) [Streptomyces sp. NBC_01460]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAGGTGCGGTGGGAGGAGCTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGGGAGAACGGCGGCGGCGCGAACCG
CGACGACGCCATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CACTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGTGACGTCTCGGGCGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGACGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGATCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTCCAGATCCTGGTCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGTGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGTCTGC
GCGCCATCATGGAAGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACC
CCGGACGTCGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAACCGCGCACGATCGGCAAGAACGACGGTGGCCG
CCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.056	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509