Detailed information NTG0676966

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG445_RS16680
• Genome accession: NZ_CP109470
• Coordinates: 3881627..3882913 (-)
• Length: 428 a.a.
• NCBI ID: WP_054212896.1
• Uniprot ID: A0ABW3XEF3
• Organism: Streptomyces sp. NBC_01462
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3876627..3887913

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG445_RS16670 (OG445_16680)	-	3877803..3880433 (-)	2631	WP_329526355.1	valine--tRNA ligase	-
OG445_RS16675 (OG445_16685)	-	3880569..3881546 (+)	978	WP_329526356.1	hypothetical protein	-
OG445_RS16680 (OG445_16690)	clpX	3881627..3882913 (-)	1287	WP_054212896.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG445_RS16685 (OG445_16695)	clpP	3883074..3883754 (-)	681	WP_168528110.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG445_RS16690 (OG445_16700)	clpP	3883882..3884487 (-)	606	WP_060897745.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG445_RS16695 (OG445_16705)	tig	3884984..3886381 (-)	1398	WP_329526357.1	trigger factor	-
OG445_RS16710 (OG445_16720)	-	3887053..3887379 (-)	327	WP_329526358.1	hypothetical protein	-
OG445_RS16715 (OG445_16725)	-	3887673..3887867 (-)	195	WP_054231893.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46825.63 Da
• Isoelectric Point: 4.7360

>NTDB_id=676966 OG445_RS16680 WP_054212896.1 3881627..3882913(-) (clpX) [Streptomyces sp. NBC_01462]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELEEKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
AALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=676966 OG445_RS16680 WP_054212896.1 3881627..3882913(-) (clpX) [Streptomyces sp. NBC_01462]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAAACGA
GCGAGGTCCGCTGGGAGGAACTCCCCAAACCTCGCGAGATCTACGAGTTCCTGGAGGGGTACGTCGTCGGCCAGGAGTCC
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCGGGTGAGAACGGCGGCGGTCAGAGCCG
GGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTGCTGGGTCCCACGGGCTCCGGCAAGACCCTGCTGGCCCAGA
CACTCGCCCGGATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGCTACGTGGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGTGAGGGCGTCCAGCAGGCGC
TGCTGAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCCCGTGCGGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAGCTGGAGGAGAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGTCTCCCGGTCATCACGTCGGTCCACAACCTCGACCGC
GCGGCGCTCCTCCAGATCCTCGTCGAACCGCGCAACGCGCTCGTCAAGCAGTACCAGCGTCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTCGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACC
GCCGACGTGGTCCTGTCGAACGTCAACCCGACGCTCATCCCGCGGGATGCCCGCGGGCGGGGGCCGGGGGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519