Detailed information NTG0676866

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG707_RS11920
• Genome accession: NZ_CP109467
• Coordinates: 2592827..2594119 (-)
• Length: 430 a.a.
• NCBI ID: WP_329117277.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01465
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2587827..2599119

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG707_RS11905 (OG707_11915)	-	2590003..2590929 (+)	927	WP_329117272.1	hypothetical protein	-
OG707_RS11910 (OG707_11920)	-	2590944..2591756 (+)	813	WP_329117274.1	hypothetical protein	-
OG707_RS11915 (OG707_11925)	-	2591773..2592747 (+)	975	WP_329117276.1	hypothetical protein	-
OG707_RS11920 (OG707_11930)	clpX	2592827..2594119 (-)	1293	WP_329117277.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG707_RS11925 (OG707_11935)	clpP	2594277..2594963 (-)	687	WP_329127742.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG707_RS11930 (OG707_11940)	clpP	2595028..2595633 (-)	606	WP_329127744.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG707_RS11935 (OG707_11945)	tig	2595878..2597269 (-)	1392	WP_329117279.1	trigger factor	-
OG707_RS11950 (OG707_11960)	-	2597771..2597965 (-)	195	WP_329117281.1	hypothetical protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47143.97 Da
• Isoelectric Point: 4.8306

>NTDB_id=676866 OG707_RS11920 WP_329117277.1 2592827..2594119(-) (clpX) [Streptomyces sp. NBC_01465]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKIIEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLDKVIEGRSGAKGIGFGATIQSKRERADRNLFADVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPKNALVKQYERLFELDGVELEFDREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRIIGNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=676866 OG707_RS11920 WP_329117277.1 2592827..2594119(-) (clpX) [Streptomyces sp. NBC_01465]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGGCCAGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCAGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTATGAGTTCCTGGAGAGCTACGTGGTGGGCCAGGAGCCC
GCCAAGAAGGCGCTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGCCCAGGGGCG
CGACGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTCCTCGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCGCAGA
CGCTCGCCCGGATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAGAACCCGTCGATCACGCGCGATGTCAGCGGCGAAGGCGTCCAGCAGGCCC
TGTTGAAGATCATCGAGGGCACGACCGCCTCGGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGACAAGGTCATCGAGGGCCGCTCGGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCAGTCGAAGCGGGAGCGGGCCGACCGCAACCTCTTCGCGGACGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTGCCTGTGCTGACGTCGGTGCACAACCTGGACCGG
GAGGCTCTGCTCCAGATCCTGATCGAGCCGAAGAACGCCCTCGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGAGTTCGACCGCGAGGCGCTTGAGGCAATCGCCGACCAGGCGATCCTGCGGCAGACGGGTGCGCGTGGGCTGC
GGGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCGGACGTCGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGGATCATCGGGAACGACGGGCGTCACGA
GAAGTCGGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.524	93.721	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.155	95.814	0.509