Detailed information NTG0676758

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OIU91_RS28840
• Genome accession: NZ_CP109455
• Coordinates: 6356024..6357307 (+)
• Length: 427 a.a.
• NCBI ID: WP_329151337.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01456
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6351024..6362307

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OIU91_RS28805 (OIU91_28835)	-	6351527..6351721 (+)	195	WP_030415520.1	hypothetical protein	-
OIU91_RS28810 (OIU91_28840)	-	6351759..6352145 (-)	387	WP_329151335.1	arsenate reductase family protein	-
OIU91_RS28825 (OIU91_28855)	tig	6352821..6354221 (+)	1401	WP_329151336.1	trigger factor	-
OIU91_RS28830 (OIU91_28860)	clpP	6354509..6355111 (+)	603	WP_329155327.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIU91_RS28835 (OIU91_28865)	clpP	6355177..6355854 (+)	678	WP_329155330.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OIU91_RS28840 (OIU91_28870)	clpX	6356024..6357307 (+)	1284	WP_329151337.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OIU91_RS28845 (OIU91_28875)	-	6357381..6358343 (-)	963	WP_329151338.1	hypothetical protein	-
OIU91_RS28850 (OIU91_28880)	-	6358520..6361168 (+)	2649	WP_329151339.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46728.52 Da
• Isoelectric Point: 4.8277

>NTDB_id=676758 OIU91_RS28840 WP_329151337.1 6356024..6357307(+) (clpX) [Streptomyces sp. NBC_01456]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLNGYVVGQDP
AKKALSVAVYNHYKRVQAGENGPGRGEEGIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAFADATALTEAGYVGEDV
ENILLKLIQAADFDIKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQI
DTTNVLFIVGGAFAGLEKIIESRSGAKGIGFGATIRSKREIESKDQLQDVMPEDLVKFGMIPEFIGRLPVLTSVHNLDRE
ALLQILVEPRNALVKQYKRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQAVMYEIPSRKDVARVVITE
DVVHSNVNPTLVPRNRGESGEPQEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=676758 OIU91_RS28840 WP_329151337.1 6356024..6357307(+) (clpX) [Streptomyces sp. NBC_01456]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCATTCTGCGGAAAGAGTCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCTGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAAATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCGCGGGAGATCTACGAGTTCCTGAACGGCTATGTCGTCGGCCAGGACCCC
GCCAAGAAGGCGCTGTCGGTCGCCGTCTACAACCACTACAAGCGGGTGCAGGCGGGCGAGAACGGCCCCGGCCGCGGCGA
GGAGGGCATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACCGGCTCCGGCAAGACGCTGCTCGCCCAGACCC
TCGCCCGGATGCTCAACGTCCCCTTCGCGTTCGCCGACGCCACGGCGCTCACGGAAGCCGGCTATGTCGGCGAGGACGTC
GAGAACATCCTCCTCAAGCTGATCCAGGCCGCGGACTTCGACATCAAGAAGGCCGAGACCGGCATCATCTACATCGACGA
GATCGACAAGGTCGCCCGGAAGAGCGAAAACCCGTCGATCACCCGCGATGTCTCCGGTGAGGGCGTCCAGCAGGCCCTGC
TGAAGATCCTGGAGGGCACCACCGCCTCGGTCCCGCCGCAGGGCGGCCGCAAGCACCCCCACCAGGAATTCATCCAGATC
GACACCACCAACGTCCTCTTCATCGTGGGCGGTGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCCCGGTCCGGTGCCAA
GGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGCGAGATCGAGTCCAAGGACCAGCTCCAGGACGTCATGCCGGAGG
ACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGTCTCCCCGTCCTCACCTCGGTCCACAACCTCGACCGCGAG
GCCCTGCTGCAGATCCTGGTCGAGCCGCGCAACGCGCTCGTCAAGCAGTACAAGCGCCTCTTCGAACTCGACGGTGTCGA
GCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTGCGCGGCACCGGCGCCCGTGGTCTGCGCG
CCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGATCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACCGAG
GACGTCGTCCACTCGAACGTGAACCCCACCCTGGTCCCGCGCAACCGCGGCGAGTCCGGGGAGCCGCAGGAGAAGAGCGC
CTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (317-394)

• AAA domain (Cdc48 subfamily) (AAA_2) (114-310)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.594	93.911	0.588
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.171	96.019	0.511