Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilX   Type   Machinery gene
Locus tag   MRK30_RS01710 Genome accession   NZ_CP095357
Coordinates   353025..353834 (+) Length   269 a.a.
NCBI ID   WP_005067126.1    Uniprot ID   A0A009NM66
Organism   Acinetobacter pittii strain 19MO01SH04     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 348025..358834
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MRK30_RS01675 (MRK30_01680) - 348583..348738 (-) 156 Protein_321 hypothetical protein -
  MRK30_RS01680 (MRK30_01685) rpoZ 348777..349055 (-) 279 WP_002116990.1 DNA-directed RNA polymerase subunit omega -
  MRK30_RS01685 (MRK30_01690) gmk 349128..349757 (-) 630 WP_005804544.1 guanylate kinase -
  MRK30_RS01690 (MRK30_01695) ispH 349880..350830 (+) 951 WP_002116992.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase -
  MRK30_RS01695 (MRK30_01700) fimU 351000..351473 (+) 474 WP_032057265.1 GspH/FimT family pseudopilin Machinery gene
  MRK30_RS01700 (MRK30_01705) pilV 351467..352027 (+) 561 WP_080777128.1 type IV pilus modification protein PilV Machinery gene
  MRK30_RS01705 (MRK30_01710) pilW 352027..353028 (+) 1002 WP_032057268.1 PilW family protein Machinery gene
  MRK30_RS01710 (MRK30_01715) pilX 353025..353834 (+) 810 WP_005067126.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  MRK30_RS01715 (MRK30_01720) pilY1 353846..357700 (+) 3855 WP_032057269.1 PilC/PilY family type IV pilus protein Machinery gene
  MRK30_RS01720 (MRK30_01725) pilY2 357711..358193 (+) 483 WP_002116770.1 type IV pilin protein Machinery gene
  MRK30_RS01725 (MRK30_01730) pilE 358190..358615 (+) 426 WP_002117055.1 type IV pilin protein Machinery gene

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 28531.35 Da        Isoelectric Point: 7.7238

>NTDB_id=676470 MRK30_RS01710 WP_005067126.1 353025..353834(+) (pilX) [Acinetobacter pittii strain 19MO01SH04]
MTHLIHKSRSKEKGATLIVVLIILLIVISVGVLAIRVAIVSLKVATNSQVSQLNFQSSDTPLELIVQMNPTTLTNITNVI
GAALKEHESNPGAEYNFCYKPVSTATNFAQTRGASLLRAGSANNAVVEDGGVAGFCNLTTDYGSNRQAVVTQVAVSVPTD
AASDIPGSNLPRGTNTSEGTQLPKSMLSTQRIRVITTAFLPAYASTSIETLQRDCLSTSSAKISDNFDTALTAKQTLAEC
LANHNVPFSTQVQEFNYTNKLTQITAPGS

Nucleotide


Download         Length: 810 bp        

>NTDB_id=676470 MRK30_RS01710 WP_005067126.1 353025..353834(+) (pilX) [Acinetobacter pittii strain 19MO01SH04]
ATGACCCATTTAATTCATAAAAGTCGATCTAAAGAAAAAGGGGCAACCCTTATTGTTGTACTTATTATTTTATTAATTGT
TATTTCTGTAGGTGTTTTAGCAATAAGAGTGGCTATTGTTTCTTTAAAAGTTGCTACCAATAGCCAAGTGAGCCAATTAA
ATTTTCAGTCATCTGACACACCTTTAGAACTCATTGTGCAGATGAATCCTACCACCCTAACTAATATTACCAATGTGATT
GGCGCCGCGCTCAAAGAGCATGAAAGTAACCCAGGCGCAGAATACAACTTTTGTTATAAGCCTGTTTCTACAGCAACAAA
TTTTGCTCAAACCAGAGGTGCAAGTTTACTTCGAGCAGGAAGTGCCAATAATGCGGTTGTCGAAGATGGCGGAGTGGCGG
GTTTCTGCAATTTAACAACTGACTATGGAAGTAATCGTCAAGCAGTGGTTACCCAAGTTGCTGTAAGTGTTCCAACAGAT
GCTGCTAGCGATATCCCAGGTTCAAATTTACCACGAGGAACAAACACCTCGGAAGGTACGCAACTTCCTAAAAGCATGTT
GTCTACGCAACGTATTCGAGTGATCACAACTGCGTTTTTGCCAGCCTATGCTTCTACCTCTATTGAAACTTTACAAAGAG
ATTGCTTAAGCACGAGTTCGGCAAAAATTAGCGACAATTTTGATACCGCATTAACGGCTAAACAAACATTGGCGGAATGT
TTGGCAAATCATAACGTGCCTTTTAGTACTCAAGTTCAAGAATTTAACTATACCAATAAACTCACTCAAATTACGGCACC
AGGTTCATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A009NM66

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilX Acinetobacter baumannii D1279779

89.706

100

0.907